LOC103036211


Basic Information

Item Value
gene id LOC103036211
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035913.1
NCBI id CM008316.1
chromosome length 28317440
location 11545936 ~ 11548240 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007258440.3
GCTGGTCTATATAAAGATGAAGGATGCAGCAGTGGGACTCAGACCTGATTCACAATCAAAGCTTAGACAGAAACTATTACTGTCGCTGTCATCAAAGCAAGTTCTTTTAGAATGATGAAGACCCTGTTGGTGACTCTGCTTCTTGCTGGGTTGGTGATGAGTGGTTCTGCCCTGAAATGTAACAACTGTAGATCAACGGGCTCAATTGGCACCACTTGCAGACCTGAAACCTGCGACTACAAGAAAAATGCTTGCGTCTCTGCCTTTTTCACTGTCCCCCCCTATAACCGCTTTAAGAGGTGCATTGCTATGTCTGACTGTGAAATCCTGAAGATCACTCCCAACATCCAGGCCCATTGCTGCCAGACAGACCTTTGCAATTAAGTTACAAAAACTCAATTACACTCGCTAaccttaaaatgtaaattaagcaaaattaaagatgtcaaaaatatgatttgttGATAATTCAAATGGTTGTGGTTTTGTAATTATTTGAGTGCTTTATGTATTAAAGGAAAGGTATGGAACAAAAGTATGTAATAACTTTTAGATGAATCATAAATTAGCCTTTTACAAAAAGCCACCACAAACAcctacattatatttaaaatctgtaCAGAAACAAACCATGTTATTTGATATTTGAATTCTGTAATTGACAATTACGGCCTGATATTACATTCTTAAATCataaggatttctattcaagcattacataaaacgatgaatgttatttaaaaatcctaattgtacataaaaatataaaaaaatattgaagtaaATCTCTAACTGTGAAAAACATAACATTTCAGCTTTccttaagtacattttaaaattaatatttaagtaaatgcaaattaaacatttaatgaccTTAGTTTTTATGTTCactttcaaacatgcagaatttgaggttgattcctgttatagatctgaaattattaagtggagaaCAGAGTGGAAAGTCAGCTAGTATCCTGTAGGAGTCTCCAAAGCCctacttatatataaatatatataaatatataaatctacttaagtaagCTTACCTTGTTTTGTATGTTCCGCTGCATCAGAAAAAAGGGAGGTGccttctctctttacctcagGGACTCTGGGGCTGCTTCTGGAAaattacagtgtaaatttaagtaGTTATTTACTGGGCTGACTTAGATTGACAATAAAGTCAACTTTATTGACTTAGAAGCTCAGAATCATTGTCTGATCTGTTTGTACTTTATATAGATGGTTAAATAAAAccttacagtaccagtcaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007258440.3 True 1284 mRNA 0.34 4 11545936 11548240

Neighbor

gene id symbol gene type direction distance location
LOC103037664 LOC103037664,LOC108427112 coding upstream 274311 11268452 ~ 11271625 (+)
LOC103025147 vapa,LOC108280766,LOC108427204,LOC107750204,LOC107683769,LOC107684566 coding upstream 529310 10991105 ~ 11016626 (+)
LOC103031053 LOC108427202 coding upstream 610135 10887626 ~ 10935801 (+)
LOC103047654 LOC108427199 coding upstream 828118 10706239 ~ 10717818 (+)
ndufa13 ndufa13,nduad,LOC102786334,LOC106569554,LOC106600555 coding upstream 844419 10697700 ~ 10701517 (+)
LOC111194538 crygn,LOC108427116,LOC100699485,LOC107600194,LOC103353965 coding downstream 29599 11577839 ~ 11582219 (+)
ccdc94 ccdc94 coding downstream 122324 11670564 ~ 11676296 (+)
LOC103034421 shd,LOC107558290,LOC107729990,LOC107600191 coding downstream 130030 11678270 ~ 11705557 (+)
LOC103034099 NA coding downstream 165831 11714071 ~ 11721675 (+)
LOC103042008 NA coding downstream 179295 11727535 ~ 11759214 (+)
G151052 NA non-coding upstream 297510 11248103 ~ 11248426 (+)
G151028 NA non-coding upstream 437030 11108671 ~ 11108906 (+)
G151022 NA non-coding upstream 472743 11072899 ~ 11073193 (+)
G150976 NA non-coding upstream 528518 11016753 ~ 11017418 (+)
G150953 NA non-coding upstream 603933 10939983 ~ 10942003 (+)
G151138 NA non-coding downstream 112493 11660733 ~ 11713567 (+)
G151151 NA non-coding downstream 261811 11810051 ~ 11810310 (+)
G151181 NA non-coding downstream 414869 11963109 ~ 11963523 (+)
G151226 NA non-coding downstream 451083 11999323 ~ 12092980 (+)
G151227 NA non-coding downstream 534082 12082322 ~ 12084600 (+)
LOC111194536 NA other upstream 6099 11531569 ~ 11539837 (+)
LOC103037335 LOC108280688,LOC108427207 other upstream 14525 11278365 ~ 11531411 (+)
G150935 NA other upstream 804798 10740733 ~ 10741138 (+)
mau2 mau2,LOC106573592 other upstream 910395 10622659 ~ 10635541 (+)
LOC111194616 NA other upstream 1103693 10409793 ~ 10442243 (+)
LOC103037021 LOC103037021 other downstream 4299 11552539 ~ 11561544 (+)
LOC103035375 LOC108427208,LOC108280686,LOC100331938,LOC107713688,LOC107600193,LOC107558294,LOC107729982 other downstream 39669 11587909 ~ 11604041 (+)
LOC103033441 abhd8a,LOC108439870,LOC107696148,LOC107754588,LOC107687901,LOC107596234,LOC108280232,LOC103352801 other downstream 1553154 13101394 ~ 13131453 (+)
LOC103033117 LOC108439884,LOC100333521,LOC107696163,LOC107750940 other downstream 1554875 13103115 ~ 13109604 (+)
LOC107197015 NA other downstream 1681862 13230102 ~ 13236737 (+)

Expression


Co-expression Network