RNA id: TU151908


Basic Information

Item Value
RNA id TU151908
length 385
lncRNA type inter_gene
GC content 0.40
exon number 1
gene id G102767
representative True

Chromosome Information

Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 435560 ~ 435944 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

agaaacgatCTACAAACCCCCACCATAAACTAGACAAATTTCCGAGCTTAAAGTCCTATCATAAATCTTCAATAAAGCCAACCCCAATACAGGACGGAGGacataaacatctaaaaattaattaattcaaatgaaataatcttGGATCTCCCTCCCAGCCATCTGAGGAGTGGAACAGGCCCgtggcctttaaagttgtcaatATGGCGGCCCGCCGTCTTTAAAGCAGTCAGCCAGCGCAGAAACAAAGAATCTCCACCATCCTCCACAACACGGcaacttaaactcaaaagaaaacaaaaatgaacaaacaatacagCAACTAGATTGTGTGCACCCAACTAGCTGcaagtaaagtgtttaaataaaaccattgaaACCAAAT

Function

GO:

id name namespace
GO:0001525 angiogenesis biological_process

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU151891 lncRNA downstream 186711 243276 ~ 248849 (-) True G102753
TU151929 lncRNA upstream 23709 459653 ~ 463336 (-) True G102779
TU151957 lncRNA upstream 369899 805843 ~ 855589 (-) True G102803
TU152021 lncRNA upstream 441215 877159 ~ 880639 (-) True G102844
TU152035 lncRNA upstream 501644 937588 ~ 937815 (-) True G102850
TU152043 lncRNA upstream 521750 957694 ~ 963949 (-) True G102855
XM_043259592.1 mRNA downstream 83687 286782 ~ 351873 (-) True LOC122359285
XM_043259373.1 mRNA downstream 284969 98628 ~ 150591 (-) True LOC122359153
XM_043258917.1 mRNA downstream 351686 63236 ~ 83874 (-) True LOC122358932
XM_043258920.1 mRNA downstream 400620 24874 ~ 34940 (-) True LOC122358934
XM_043259599.1 mRNA upstream 18046 453990 ~ 455128 (-) True ndufc2
XM_043258774.1 mRNA upstream 529179 965123 ~ 972682 (-) True sgcg
XM_043259159.1 mRNA upstream 541417 977361 ~ 983431 (-) True slc37a4a
XM_043259160.1 mRNA upstream 541417 977361 ~ 983430 (-) False slc37a4a
XM_043258216.1 mRNA upstream 572810 1008754 ~ 1035381 (-) True ptgir
TU151874 other downstream 333626 98628 ~ 101934 (-) False LOC122359153
TU152377 other upstream 1341076 1777020 ~ 1789827 (-) True G103094
TU152433 other upstream 1409055 1844999 ~ 1845494 (-) True G103130
XR_006252662.1 other upstream 1702623 2138567 ~ 2156930 (-) True scn2b
TU152493 other upstream 1771403 2207347 ~ 2291926 (-) True G103183
TU152527 other upstream 2238130 2674074 ~ 2675712 (-) False LOC122359207

Expression Profile