RNA id: XM_043264697.1


Basic Information

Item Value
RNA id XM_043264697.1
length 6720
RNA type mRNA
GC content 0.52
exon number 14
gene id bicra
representative False

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 12891984 ~ 12904583 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

AATCAGGCGATCGCGGCGGGCCTCTGTTTCCTGCTTGTGAGCGCTGTGCTTGGGTCCTGACGCGGAGCCCGTGCAGGGCCGTACTGGAGACCCCGCGCCGCCTGCACCTCTATCGTCTCGGttgacATGGATGATGAAGATGGCAGGTGCTTGCTAGATGTAATTTGTGACCCACAAGCACTCAATGATTTTCTTCATGGATCAGAAACACAAGGCCACGTTCCTGAGGTCCAGCCACAGGCTCAGCTGTCGACAAATGAGCCAGGCCTTCCAAGAGTCAGCGTTGATTTGGACTTCCTGGAGGATGACATCTTGGGGGGATCGCCGGGAGGAGACAACGGAAGCAATGGTGTTGGGACAAATCATGAGCCTTGCGACATTTTGCAGCAGAGCCTGGCAGAGGCTAACATCACAGAGCAGAGCCTTCAAGAGGCAGATGCTGAGCTCGACCTCAGTCAGTTTGGGCTGACTGGCCTCACGCAGGTGGTCCAACCCTTGCCTGATGCTGGCCTGTCTGGGGTGGGCATTGGAGGTGCAGCTCAGATTTTCCCAAACCAAGGCACCCCCACTGCACCCTCTAATGCCACCCCAGACATGCTCAGCTCAGTCCTGGCACATCCAGGCCTGCAGCTTCAACCCCAGGTCATGAACAAAGCTATCAGCGTCCAGCCATTCGTGCAACAAGTCGGGCTTGGAAATGTAACCCTTCAACCTATTTCGAGCCTTCAGGCCTTACCGAATGGCAGTCAGTCTGGACCGTTGGGCATTGGACAAATTCAAGTTGTGGGCCAACCCactgtaatgacaataaatccATCTGGGCAGCAGATCTTGGCGAAAACCATGGGTGGCTACCAACTGCATCAACCTGGGCCTGAGGCAGCAAGCGCTGGAACGCAGGCTGGGCTTGGAGGCTCTGTTTTGAGTTCAGGGGGAGGACTTTTAATTCAAGGGGGCAAGGCCACTCTAGGGTCCCCTGCCTTAAATGGGCCGGCTGTCTGCTTGAGCAACACAAATACCAACAACAGCGCAACTACAATGGCCGCTGCTGGTGGTATTGTGGGTTTCGGTAATGCCTCTTTGGGTGCAGGAATTGGATCTCAAACCCAGCCTCAAGGCCAAATTATGCAGAATGTCATCATCCAGAGAACGCCAACGCCAATACAGCCCAAACCCCCGCAAGGGGGTGCCATCCAACCCAAAGTCTTCAAGCAGCAGCAACAGCTTCCTGCTCCACATGCCTTGCCAAATGACGCTAATAAGGCTCTGGGGGTGCAGCAAATTCCAGTATCAGCTGGTCAGAATGTAACGTTCCTCGGGAAGCCTGGCTCAAATGTAGTCTTGAGCACACAGGCCACGTCACAGGGAACGCAGTTCTCTCAAGCGCTCTTTAAGCAACAGGGCCCCCAAACGTCAGGCAAACCGCTCAGTGTTCACTTGTTAAACCAACAGGGCAGCATTGTCATTCCCTCACAAACTGTCCTGCAGAGCCAAAATCACCAGTTCCTGTTACCGGGGCTTCAAGCGGGAGGTCAGATCCTGACTCAGCATCCCGGTGGCCACATCATTACTAGTCAGGGGCCTGGAGGGCAGATAATCGCTAATCAGAtcttgacagccaatcagaacataAACCTGGGTCAGGTGTTGGCCTCACAGGGTCACCCTGGTGCCGCCCACATTCTCTCTGGACACATTCAGCTGCAGCCCGGTCAGATGGGTCAGCCCACACTGTTCCAAATGCCGGTGTCTCTGGCGCAAACGCAGACACAAGCCCATCCGGTAACGGGCCATGTACAAACGGTCATCCAGGGCATGCCGATCCAAAATTCCCTGTCTGTGGAGAGCCTTAGCCCAGCAGTCAGTTTACAGACGTTGCAGCAATCTGGTGGCATCCCTAATAACGGTAGCAGCGGATCGACGGCCATGGCGCCGTGCCAGCCTGGAGAGGGCATCACGGTATTGGGTGGCTCTACCGACCCTGCTGCTCAACCGGCACAGACCCAACCGCAGCCCTCAATTCTTACGGTTCAGACAACTCCACCGGTTTCAGTAGCAGCTTCGGTTCCTTCCTCTTCATCGCCATCCCCTACTTTGGTCACATCCACGTCCTCAATGGTGGGTTTGGGTCCCCAGGCCCAGCACAGCCCCGGAAAGGTGTTGTTCACATCACCTGGTTCCAGCATGATCCTTAGTCAGGAGTCCCTTCAAATGTTCCTGCAGCAGGACCAACAGCAGCAAGCAGGAAAAGACCCACCTGCCGCTGTGGGTGTACCTGCATCTGTTATCGTCAGCGGCAGCAGTTCTGGTCCCACCCCTTCAGGCCATGACAACTTGTTAGCTGAGACTCGGCAGAGGCAGAGTCCCAGCCCTTCCCTTGGCCCCGCCCACATGGCAACAGTGGTTAACAAGGTTCCGTCGGCAGCACATTCACAGACTATAAAGATCCAAAGCGCCTCCCCATCTCAGCCTGTGGTCACCCCTGCACCAACACCCACCCTAACTGACAGCCCCCAACCTGCCCAAGCTTCTCCCATAACCATCGGGCAGCAGATCCAGTCTCCTCACCAGCACCAGCAGTCTCGGCCTCCATCGCAGCCCCAGCCTCAGTCTCAGGCACAGACTCCCTCTCGCTCCTGCACGCCTTCCTCTCTAACACCCCTCTTTATTATACACAATCAGATCGGAGGTTCTCCACAACCACCACAGCCAGCTCCTCCACCTCAACAGCAGCAGCCTCAGCAAATACAAGTGCAGCTCCAGCCTCAAGTTCTTCCTCAGACTCTGCCTCAGCCAACCGCCCTGCAGCCTGACATACCTCCTTCCTCGTGTTCCCCGAAGCCTCCGCAGCCACTTCCTGCACAGTTCCAGTTCCAGCCTGCTGTGAGCTCGCCTCCAGCTGCAGTGGTGAAACAGCAGGTGACGGTGGTGCCGGGGCTGACTGCAGAACAGCAGCATCACCTTCAGCTGGTCAGTGCGCAACTGCAGACTATGTCATCCATCACACAGCCCTCTCCTCAGCAAAAGCAGCTCTTGGAAAAACTTCACCAGGTCCAGCAAAACATTCTTCTCCAGGCTAAGCAGCAAGCTCAGGCACAGGCTCAAGCTCAAGCTCAGGCTCAGGCCCAAGCCCAGGCCTCTCAGCAACAGGCCACAAACCAGTTTAACAAAATGCCAGATCAGCCTTCAGTCCAAGCTGCAACTTCAACGGCCAGTGGCACCATCCAAGCGCCAGTCCAGTCCCTTCTACAGCAGAAGACTGTGCTTGTCAAGTCCTCTACTACAGGTGCAAATGACACTCAAGTTTTTTCTGCTGTGTCTGCTGGGGCTACAGTGAACCAGGGAATCACGACTCCAAACCTTGCGCAGGCTGTTCAGGCAAAGCCAGGCGTCATAAGTTCAGTTGGTGGGCTGACTCTGAATAAAGCAGGTTTGCAGATACAGGTTTTAGGTGCTGCACTCTCTCAAATGCCTGCACCTCCACCACCTGCTTCCCAAACACAGACTTCAACATTAAAAAGGCCTTTTAGTATGGAACCAAGCAAAGAAGCTagGATGTTGGAACAGTTGCGAAAACAGCAAGGCTCGGTTCTCCATCCTGACTACAGTTCTCCTTTTCGCTCATTTGAGGACACACTTCATCGACTGCTGCCGTACCACCTGTACCAAGGCATGGCTTCATCCCCAGAAGACTACCGCAAAGTGGATGATGAATTCGAGAATGTCTCATGCCAACTCTTGAAGCGCACCCAAGCAATGGTGGATAAATATCGTCACTTGCTTTTTGAGGAATCAAAGCAGAGGCTGGGTCCCTCTGCAGAGATGGTTATGATTGACAGGATGTTCATTCAGGAGGAGAAGGTTGCTCTTAGTCAGGACAGGGTTCTAGCCAAGGAGAAACCAGAAGAATTTGTGGCCAATTCCTGTTTGCTGGACAGCAGTGCCGTAAGACCTGTACAGGTGGAGCTGAGTTCTGTACGaacctcctcctcatcatcgtCCTCGTCATCGTCATCTTCAGCAGCGGCAGCAGGTGCAGGTCAACCTGTGGTAGCTGCGCCTGCTCCAGCTGCAGCTGTTGCCCCTGCTCCAACCCCAACCTCTGCACCTACTCCAGCTGCTGCCCCCACTCCTGCTTCTACCCCTACCCTTTTCCCTCCTACCAAGCTGGTGATTAAACAAGGTGGAGGAGGAGCGTCGGTATCCTGGTCCACCAGCTCCACGCCTACTCCTGCTCCCGTGGTCCGGCCAGCTGCAGAGCCAGTCACAGCAAGCGCCTCCTTCAGCCGCACTCCGTCCTCCCGCCCTGCTGATGATGACGACGATGTCACGCTTCCCCAGCGGACCAGCAAACCGCCCATCAAGACCTACGAGGCACGCCAGCGAATAGGTTTGAAGTTGAAGATCAAACAGGAGGCAGGATTTAGTAAGGTGGTTCACAACACTGCTTTAGATCCAGTCCACTCCCAATCCCAGCTCACTCCACAACCGCtgcctcctgagcagccgcagAAAGTCAAGCCCACCCATGTAACCCCACCCACCACAGTCATTAGAACTCCTCCCCCAACTTCTTACCCCACCTCCTCTTCCACCATCACTACAGTAACAACACACACAGGCTCCTCTGCCAGTAGCGCAACTTCCTCTAGTGGACCTACGCCCTCATTTTCTTCCTCCTGGTCTTCGTCGTCCCCTTCCACATCCACGGCACAGATGAACGGCACTCTAGAACACCACGAGGTAGGCGGAGTTAAACGGAACCCAGCAGCCACAACGAATCCTCCATTAACCACTTGCCGGCTCCCGCTTCGAAAAACGTACCGTGAGAACATCAGTCCACGTCATAGGCCGGGGGTACCAGGAGGAGGTGGAGATACGTTGCCCATTCTACCAGCAGTACCCACCATTACTACTTCCCCCCAGCCACAAGGCTCCTCTCCTCAAACTGAACGAACTGTGATAGCCAGTGTGAAACTAGAGAGGCAGGGTGGACATGGGCGGTCTCACCCCCGTTCAGAGTCGCAGAGCCTCGCAGCAGTAGAGGACGTCCTCTACCGTGGCATCAAAAATGCGTACCAACATCACAGAGAGTTCTCTGACaaagaggatgaggaagaggcAGAGGAAGGTGGCCGCTTGGGACGGTTGAAGGGCATAGGGAGCAAAAACCGAGAAGGAGGAAGGGGTACCTTTAGGATGGATCAGCATGCTCCTGGCCCACCTTCCCCTGGAGAGTCTTCCTGCACAAGAGACTCTACACTACCTGCCAAACGCTGTAAGTCCGACTCTCCGGATATGGACAATGCGAGTTTCTCCAGTGGCAGCCCGCCGCCTGACGACTCGTTGAATGAGCACCTGCAGTGTGCCATAGACAGTATACTGAACCTCCAACAGGGCCCTCCTGGACATGGAGGCTCAGGGAAAGCGGCTTTAGGGAGGGTTCATGGGGAAAACCTGCCTAATCAGCACCAAACCCACCCTTCCTACAGACAGTCCATGCCTCCCCTCTCCACACCACCCTCGtctgcccccatgtcccagcaTCCACAGGTGGGGGGCCGAGGACAAAATGGAAATTTGGTTTCACAGACGCACAGTAGATAACAGCCCCTTTAGCAGATGTTGACTGAAAGACTGAAAAGCAGTATGTCAATGGATAGGGGAAGCAAACGGAGACACTTTTCCCATGATCtgtgtttgctttgtttgtctGTGGTTTGTGCTGATGAAATGTGTTCTTTTGGTTTACATATTGGCCCTTTAAGTGTACtttctaaagtaaaaaaaaaaagtgcactttgaTATGATTTTCAAAATTTTGTCCCTCTGTTTTTTCCTGGGTTCGAATCTGGGACGGTTCCTACGTTGGTTTCCCAATTTAAAGATTTCTCTCAGCTTGTGAGAGACAAAATATATGaccattcatttaataaataatgtttgtaattACTGTGACGTATGCAGTTTGCAGGAACTTTTTAAGTGATATCATGAAAATTGTCATATCAAACAATAGTTATTTGGTTATTTTGGAGAATTTATTTTGCAGACACTATTGACACATATTTTTCCCTGTGTTAGAATGGTCCCCCTTTAccatgaaattatatttttgggaACTGGTGATCACTGTGTAAAGGCTCattaatgcataataatgtAGTGCTCTTGTCTCCTCTGAGACATGAAATCTGGTTTTGGTTATCCAGCTACATGAAATAACAATGAAACATTCACAAACAGAAAAGTCACCAGAACTGTAGAAAATCTCTTGACCTTTTAAAGCATTCCAGCATCAAGAGCACATTTACAAATCAAACATCACGAACAGCACAGCAAATGTGGTCaccttttttaatcaaagaagtgtatttttttatgtctggGAACATCTCTGAAGTTTCAAGACATACAGCCTCCctcatttatgcttttttttttgtaggcatATGTATGTTCAGAcacttttacacatttaagatAGAATCACTGAAAGATCTTTGAACCGTTCAGAAGCAAACACAGCGAAAGCAatgacatggaaaaaaaagaacaataataatgtaaagagaaaaaagaaaatagaactGTAAGAATTTGAAGTATAGTACTACAGattaattttgtattgtatttattgtgtataatgacactttttaaaaaaaactgtacatttagtaaaactgtaaattaaaccTTGCTTCTTTTATGAAACAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU185741 lncRNA upstream 250548 12641192 ~ 12641436 (+) True G125784
TU185740 lncRNA upstream 255601 12636156 ~ 12636383 (+) True G125783
TU185704 lncRNA upstream 302040 12579725 ~ 12589944 (+) True G125760
TU185696 lncRNA upstream 479739 12411865 ~ 12412245 (+) True G125753
TU185692 lncRNA upstream 497252 12393511 ~ 12394732 (+) True G125750
TU185840 lncRNA downstream 105291 13009874 ~ 13012900 (+) True G125855
TU185872 lncRNA downstream 311931 13216514 ~ 13218281 (+) False LOC122362547
TU185885 lncRNA downstream 433171 13337754 ~ 13339066 (+) True G125877
TU185887 lncRNA downstream 442095 13346678 ~ 13346937 (+) True G125879
TU185889 lncRNA downstream 445908 13350491 ~ 13351730 (+) True G125881
XM_043265099.1 mRNA upstream 16294 12868041 ~ 12875690 (+) True dhx34
XM_043216591.1 mRNA upstream 24261 12854160 ~ 12867723 (+) False st14a
XM_043265033.1 mRNA downstream 759 12905342 ~ 12914313 (+) True ehd2b
XM_043216735.1 mRNA downstream 12643 12917226 ~ 12925468 (+) True napab
XM_043263899.1 mRNA downstream 22102 12926685 ~ 12931168 (+) True b3gnt2l
XM_043216851.1 mRNA downstream 42258 12946841 ~ 12955945 (+) False glb1l2
XM_043216853.1 mRNA downstream 42265 12946848 ~ 12955945 (+) False glb1l2
TU185810 other upstream 7372 12880588 ~ 12884612 (+) True G125836
TU185801 other upstream 69203 12809450 ~ 12822781 (+) True G125830
XR_006246968.1 other upstream 1654837 11234331 ~ 11237147 (+) False selenot1b
TU185364 other upstream 1654843 11234349 ~ 11237141 (+) False selenot1b
XR_006253172.1 other upstream 1660270 11226115 ~ 11231714 (+) False ccnl1a
XR_006246942.1 other downstream 12643 12917226 ~ 12925468 (+) False napab
XR_006246961.1 other downstream 42258 12946841 ~ 12955945 (+) False glb1l2
XR_006253128.1 other downstream 311901 13216484 ~ 13218337 (+) False LOC122362547
XR_006253129.1 other downstream 312074 13216657 ~ 13218346 (+) False LOC122362547
TU185911 other downstream 522514 13427097 ~ 13430765 (+) False rpl35a

Expression Profile