RNA id: TU209058



Basic Information


Item Value
RNA id TU209058
length 976
lncRNA type read_through
GC content 0.49
exon number 2
gene id LOC122324315
representative False

Chromosome Information


Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 24254393 ~ 24517743 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


TGAGACAGAAATTCAGGTTTcaccatgtgtttttatttctgaaaaacaagacaacacATGCCTGCAGCCAGGCAAAGGTCTTTCCCCTTCCATGCAGAAAGAAATCATGCTCGACTCAATCCAGCACAGCCAGCAGACTCAGTATCAGTGAAACACAGTGCTTATTGTGCTCAGACAATACTGCAATCCATGAACATCAcattacgtaaaaaaaaaacaaaaaaaaggggtaCATTATGGCTCAAAACAGAGCAAAAAGTTGACAGTATGCTTTAGTTACATTATGATTCTTTCAGGAATCACGACTGAGATCAGGTCAACCCTTCTACAGGTCAAAGAGAACGACAGGATGTTAAGGAATGATTACGGAAAAGTGACTGGGGGGAATTCTAGACTGGGTTTAATCGACTTCCTCCATGCGAGAAGCGTCATCGTCTCCTTCCAGAGGTGGGATGTCTTCAGGAACGGGAGCAGAGCTCGGCTCTTCCACGGGTACGTCTTCATCCTCATCGATACCTGGAGACGTAAACGAGAATTAGCGACGTACGACGCTACCGAAacgtgaaagagagaaagggttAACAAACTAACCCAATCCCAGCTTGATCATTCTGTAGATGCGGTTCGAGTGCGTCTGAGGATCGTCCAATGAGAAGCCGGAGGAAAGCAGGGCGGTCTCGAACAGGAGGATGACCAGATCCTTCACGGCCTTGTCGTTTTTATCGGCGTCGGCCTTCTGCCTCAGGGTCTCCATGATGGGGTGATCGGGGTTGATCTCCAGGTGTTTCTTGGCCATCATGTAGCCCATGGTGGAGTTGTCCCTCAAGGCCTGGGCCTTCATGATCCTCTCCATGTTGGCCGTCCAGCCGTAGGTGCTGGTCACGATACAGCAGGGAGAAGAAACCAGCCGGTTTGAAACGGTGACCTGGAAGAGAACGGGGTCGGGTTGAGCGACGGCAAGGAGAGGCGCGGTTGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU209085 lncRNA downstream 10560 24254441 ~ 24256812 (-) False LOC122324315
TU209089 lncRNA downstream 73706 24192973 ~ 24193666 (-) True G141625
TU208874 lncRNA downstream 140881 24126179 ~ 24126491 (-) True G141516
TU208859 lncRNA downstream 259971 23982330 ~ 24007401 (-) False G141503
TU209098 lncRNA upstream 4234 24521977 ~ 24522211 (-) True G141634
TU209086 lncRNA upstream 4640 24522383 ~ 24523831 (-) True G141622
TU209088 lncRNA upstream 27273 24545016 ~ 24545549 (-) True G141624
TU209133 lncRNA upstream 94123 24611866 ~ 24616647 (-) True LOC122325459
XR_006247301.1 lncRNA upstream 96528 24614271 ~ 24616410 (-) False LOC122325459
XM_043218633.1 mRNA downstream 6203 24254393 ~ 24261169 (-) False LOC122324315
XM_043218632.1 mRNA downstream 6314 24254393 ~ 24261058 (-) True LOC122324315
XM_043218826.1 mRNA downstream 208535 24014150 ~ 24058837 (-) True tmem121ab
XM_043219233.1 mRNA downstream 314938 23946175 ~ 23952434 (-) True serinc1
XM_043219351.1 mRNA downstream 427349 23836485 ~ 23840023 (-) True gja12.2
XM_043219085.1 mRNA upstream 6326 24524069 ~ 24532363 (-) False slc35b2
XM_043219084.1 mRNA upstream 6326 24524069 ~ 24532363 (-) True slc35b2
XM_043219086.1 mRNA upstream 14761 24532504 ~ 24544049 (-) True nfkbie
XM_043218614.1 mRNA upstream 38005 24555748 ~ 24569128 (-) True tcte1
XM_043220338.1 mRNA upstream 57605 24575348 ~ 24582578 (-) False rnf8
TU209065 other downstream 6336 24257786 ~ 24261036 (-) False LOC122324315
TU208856 other downstream 260707 24004687 ~ 24006665 (-) True G141502
XR_006247216.1 other downstream 444322 23792077 ~ 23823050 (-) False tbc1d32
XR_006247155.1 other downstream 865981 23390465 ~ 23401391 (-) False mcm9
TU209099 other upstream 8139 24525882 ~ 24530875 (-) False slc35b2
TU209125 other upstream 53670 24571413 ~ 24647421 (-) True G141651
TU209178 other upstream 329922 24847665 ~ 24851761 (-) False rhpn1
TU209665 other upstream 810837 25328580 ~ 25329605 (-) False wasf1
TU209701 other upstream 813183 25330926 ~ 25377416 (-) False wasf1

Expression Profile