RNA id: XM_043222430.1


Basic Information

Item Value
RNA id XM_043222430.1
length 3093
RNA type mRNA
GC content 0.52
exon number 23
gene id senp7b
representative True

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 13202689 ~ 13226838 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

ttgGGAAGAACGTCGCACATAAACAGAAAGAGGGATGCATACTTCTTAGTGCACTTATTGCTATTCTGCTGACCAGAATGATTTAGCAGTGCCTTTACCTGTTCATAGCCCATGCCTGAGTTTTATAGAGCGAGTCTCAGACAGGTGTGTGCTATGGCAGTCCCGTTCAGAATCCCCAAAAAGAAGCAGCCGACAGATTCATGCAGTCTTGACATGATGTCTCCTCTGTCTCGACTCCAGGACAGCAACTCGCAGAAGGGGCAGTGGGTTTCAGGCACTTATAACGGAAGAACGCTTCAAAAAAACAGTTGTAATGGAAATGTTCTGTCAAAAGACACTCAGAGGAGTGAATCGCTGAGACCCGTCAGGCCGTCTCTCGGCGGTGATTTTTCTCCGGACTCACGCGCACGCTCGGATAACATTCCCAAAGGAGCCACACGTGGACTGGTccgttttaaaatgaacaaacaaccCATAAAAGTCTGCCCCATTCAGGCGAGCAGGACACCCAGTAAGGTGTCAGAGACTCCCGGATTGAGAGCCCAGTGTCAAACTCCCACCCCAGGGAGAGACTTCGCGGGAAACAACAGaTGGAGACCCAAAAGAGCATCGGATACTCTTCTCTGCCATGATGAGAACCATACGGGCACGTCTGAGAGCTCTTTGTTCAAGATTCGCAGAGGCCTGGATTCTGGGGAACTGGAGGCATTTGGGCTTTTCCATGAGGAAGAAGAATCCGAAGGAACGCAAGGCCACTCTCAGGTGAAAGAGACACAGAGGTCGTCCGCTTCAGAGGACACGGCACACGTTTCACGGGATGACCGCAAATTAAAAACCACAGGTTCTGTTTGTGACGTCTCTAAGAACGCAGCAAGCAAAAGCAAGAATGGAACCGTGTTGAATGAAGAATCCACACCGTCCAATCATGAACCCAGCCTACACTCGTACCGCTCTCTTCAGGAAGCTCCAGCCAGGCACGTGAGGACCTCTGGAGAAAGAGCTGCCACCTCTGTGCCTGTTAGAGAAGGCCCACTGGCTTTCCCTCCGGAGGCCAAGAGCAAAGACCCTTTTGGCTCGTTTTACAGCAACAAATTCGGGAGGAAGCCCCGGGTTTTCTGCAAGACCTACAAGAGATCCAAGCCTAGCTCCACAGAGCCAAtCGTGCTGTCCAGCGATGATGAAGGAGCTGATGAGGTGAATGATGCGTCTGGAAGTTTGCAAGAGCAGCGGATCTCCGAGGGGATCAGGGACGCTCAGTCAGGGAACCAGAAGAGCCCAAAGACAAACGCAGGAGGTGAAAGGTCAGCGACCAAAGTAGAAGTGCCTTCCATCATAGAACTGGACTTCAGCAGACTCCATTACGACACCGTTGAGGCCCAGGCCAACGGGACCATTGTGatcaCAGATGAAGGCATCTCTGTACCACTGAAAGgTGTTGATGGGGAGGGTGAGGTAGCCGTTAGCGTGTCCTGCTCTGAGCTGCTCTTGTACGGCGTGTGGGATGGCGGACTGGCCCGTGACGGCAGTTTGTTTTCAAACACAGAGGAGCCCGCACCTTCTCTCCTCTTCCTCGTGTTGTCAGACGCTCAAGCCAGGCTGCTCCAGAAAGAGCTGTCTGTGCTGCACACTGTACATGCTTCAGGACAGGCCTGTCCTTTCGTCCTGCTGGTGTTGACCGGTCAGTTGGAGGATCTTCAGGCAGCTCTGTTGGCGTCTCTCATGGACGTAATTGGCCTGCGTCATGGTCAGAGCTGTTTGAGTAACTCTCTGTCCTGGTCAGATGGACTAAATCAGCTTCATTGCCACCTACGGGGCGAACATCTTATGTCCCTGCTGGGACAAAATGTGAAGGATGCTGGACAGGACACGGCAAAGGAGAACTCAAGTGGGACCAGCAGCTGGCTAAGAGAGCCAACAGTCAGAAGACCCCTGCGGAGCCACagccggcaacagagctcaCCTCGCAGGCTGATCCAGTACCCGCCTCCCCCCTCCAAGGGCGGCATTACCGTGACAACCGAGGACCTGGAGTGCCTCAAGGATGGCGAGTTTCTCAACGACGTCATCATCGACTTCTACCTCAAGTACCTTCTGTTGGAAAGAGCTGACAAAGATGTGGCCGAAAGATCTCACATCTTCAGCAGCTTCTTCTACAAGCAACTGACTCGGAAGAACGCTAGCTGTCCTGAAGACTCTGGAAGCACAGCTTCACACAGACGACATCAGAGAGTAAGAACATGGACCCGTCACGTGGACATATTTAGCAAAGACTACCTTTTTATTCCCGTAAATCATGAGGCTCACTGGTACCTCGTGGTGATCTGTTTTCCCGGTCTGGAACAGTCTGAGTGGTTACCGTGGAGAAACAAAGGCCCTGTGTCCCAGGATAAGAGTCAGACGGCTAAAGCCAGCTCTGCGGGGACTGTCAAAGAGATAGTTCTCAGCAACCGAAAGGAAACCGATCGAAACCCACTGAGCAGAAACCCCACAACCTACCGGATTGCACTGTACACAGCTGCACAAGAGATACCATCCGCAGGAGTATTACAAATGCCCTGTATTCTGGTCATGGACTCCCTGAAGCTGTCGTCCCACCAGCGGATCTACACGCTGTTGCGAGAGTATCTGCAGGTGGAATGGGAGGTTCGGAAAGAAAGCGCTCGGGCTTTTACCACTGAAAGCATTAACGGGAGTCTGTGCAGGGTCCCTCTGCAGGACAACAGCAGCGACTGCGGCCTGTACCTGCTGCAGTACGTGGAGAGCTTCCTGCAGAATCCCGTGGTGCACTTTGACCTCCCGCTGCGATTGGACCATTGGTTTCCGAGGAATCAAGTGCGCAGGAAGAGGGAGGAGCTACGAGAGCTGGTGCTGCAGCTGTACCAGCGACAGGGGGGCGGGGCTGAACAGAGCGCCAAATAAAAACAGCCGGGAACATGTCCTGTTACTAAACTAATAATTAGGGCCTCCTGTTTAGTTTGTTCGCTCGTcccgttttattttattcgttTTTCTTTTCTACTGATTAACAGATAAaggatatatttataatttaactttgtatttatttgtattaaaatggcttttaaatgtgac

Function

GO: NA

KEGG:

id description
K08596 SENP7; sentrin-specific protease 7

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
XR_006247611.1 lncRNA upstream 5030 13194740 ~ 13197659 (+) True LOC122327167
XR_006247612.1 lncRNA upstream 5030 13194740 ~ 13197659 (+) False LOC122327167
TU225740 lncRNA upstream 22414 13177836 ~ 13180275 (+) False LOC122327212
XR_006247614.1 lncRNA upstream 27363 13172733 ~ 13175326 (+) True LOC122327169
TU225246 lncRNA upstream 53882 13121725 ~ 13148807 (+) False G152200
TU225781 lncRNA downstream 78900 13305738 ~ 13306358 (+) True G152518
TU225782 lncRNA downstream 79589 13306427 ~ 13306919 (+) True G152519
TU225783 lncRNA downstream 80206 13307044 ~ 13309072 (+) True G152520
TU225784 lncRNA downstream 83003 13309841 ~ 13310361 (+) True G152521
TU225790 lncRNA downstream 127729 13354567 ~ 13355668 (+) True G152526
XM_043222428.1 mRNA upstream 22468 13176427 ~ 13180221 (+) True LOC122327212
XM_043222355.1 mRNA upstream 89956 13111482 ~ 13112733 (+) False LOC122327162
XM_043222348.1 mRNA upstream 123052 13075411 ~ 13079637 (+) True LOC122327156
XM_043222349.1 mRNA upstream 123052 13075651 ~ 13079637 (+) False LOC122327156
XM_043222426.1 mRNA upstream 127776 13063303 ~ 13074913 (+) True LOC122327210
XM_043222337.1 mRNA downstream 51533 13278371 ~ 13302756 (+) True abi3bpb
XM_043222338.1 mRNA downstream 51534 13278372 ~ 13302756 (+) False abi3bpb
XM_043222339.1 mRNA downstream 51536 13278374 ~ 13302756 (+) False abi3bpb
XM_043222341.1 mRNA downstream 51538 13278376 ~ 13302756 (+) False abi3bpb
XM_043222340.1 mRNA downstream 51539 13278377 ~ 13302756 (+) False abi3bpb
XR_006247604.1 other upstream 89956 13109810 ~ 13112733 (+) False LOC122327162
TU225829 other downstream 156315 13383153 ~ 13383777 (+) True G152558
TU225846 other downstream 190626 13417464 ~ 13418407 (+) True G152565
TU225879 other downstream 348900 13575738 ~ 13681947 (+) True G152584
XR_006247779.1 other downstream 740269 13967107 ~ 13967225 (+) True LOC122328230
TU226044 other downstream 813886 14040724 ~ 14042521 (+) False LOC122327219

Expression Profile