Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_043225251.1 |
| length | 1383 |
| RNA type | mRNA |
| GC content | 0.53 |
| exon number | 1 |
| gene id | LOC122329053 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056721.1 |
| NCBI id | CM032090.1 |
| chromosome length | 19062720 |
| location | 16680306 ~ 16681688 (-) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:0021575 | hindbrain morphogenesis | biological_process |
| GO:0021884 | forebrain neuron development | biological_process |
| GO:0048884 | neuromast development | biological_process |
| GO:0031103 | axon regeneration | biological_process |
| GO:0071698 | olfactory placode development | biological_process |
| GO:0050768 | negative regulation of neurogenesis | biological_process |
| GO:0048918 | posterior lateral line nerve development | biological_process |
| GO:0048935 | peripheral nervous system neuron development | biological_process |
| GO:0007413 | axonal fasciculation | biological_process |
| GO:0045666 | positive regulation of neuron differentiation | biological_process |
| GO:0045944 | positive regulation of transcription by RNA polymerase II | biological_process |
| GO:0051091 | positive regulation of DNA-binding transcription factor activity | biological_process |
| GO:0021772 | olfactory bulb development | biological_process |
| GO:0005634 | nucleus | cellular_component |
| GO:0003682 | chromatin binding | molecular_function |
| GO:0000989 | obsolete transcription factor activity, transcription factor binding | molecular_function |
| GO:0070888 | E-box binding | molecular_function |
| GO:0046983 | protein dimerization activity | molecular_function |
| id | description |
|---|---|
| K09081 | NEUROG1; neurogenin 1 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU234682 | lncRNA | downstream | 72346 | 16607461 ~ 16607960 (-) | True | G158462 |
| TU234642 | lncRNA | downstream | 126911 | 16553043 ~ 16553395 (-) | True | G158432 |
| TU234622 | lncRNA | downstream | 149210 | 16530052 ~ 16531096 (-) | True | G158417 |
| TU234605 | lncRNA | downstream | 179456 | 16498369 ~ 16500850 (-) | True | G158404 |
| TU234575 | lncRNA | downstream | 236269 | 16443806 ~ 16444037 (-) | True | G158388 |
| TU234703 | lncRNA | upstream | 42243 | 16723931 ~ 16724403 (-) | True | G158481 |
| TU234705 | lncRNA | upstream | 45750 | 16727438 ~ 16727715 (-) | True | G158483 |
| TU234706 | lncRNA | upstream | 46413 | 16728101 ~ 16728343 (-) | True | G158484 |
| TU234860 | lncRNA | upstream | 400519 | 17082207 ~ 17082552 (-) | False | G158587 |
| TU234861 | lncRNA | upstream | 400519 | 17082207 ~ 17082684 (-) | True | G158587 |
| XM_043225250.1 | mRNA | downstream | 2939 | 16674237 ~ 16677367 (-) | True | LOC122329052 |
| XM_043224317.1 | mRNA | downstream | 63967 | 16609478 ~ 16616339 (-) | True | LOC122328572 |
| XM_043224027.1 | mRNA | downstream | 134618 | 16541514 ~ 16545688 (-) | True | LOC122328366 |
| XM_043224307.1 | mRNA | downstream | 174503 | 16488226 ~ 16505803 (-) | False | ribc1 |
| XM_043224308.1 | mRNA | downstream | 185847 | 16488226 ~ 16494459 (-) | True | ribc1 |
| XM_043225103.1 | mRNA | upstream | 150397 | 16832085 ~ 17007286 (-) | True | plxna2 |
| XM_043225098.1 | mRNA | upstream | 489425 | 17171113 ~ 17176489 (-) | True | hrct1 |
| XM_043225099.1 | mRNA | upstream | 489425 | 17171113 ~ 17175579 (-) | False | hrct1 |
| XM_043225101.1 | mRNA | upstream | 494937 | 17176625 ~ 17184385 (-) | False | slc48a1a |
| XM_043225100.1 | mRNA | upstream | 494937 | 17176625 ~ 17179832 (-) | True | slc48a1a |
| TU234495 | other | downstream | 321601 | 16357652 ~ 16358705 (-) | False | G158336 |
| TU234490 | other | downstream | 436911 | 16240810 ~ 16243395 (-) | True | tac3a |
| TU234433 | other | downstream | 510472 | 16143833 ~ 16169834 (-) | True | G158288 |
| TU234366 | other | downstream | 671391 | 16008106 ~ 16008915 (-) | True | G158231 |
| TU234274 | other | downstream | 963056 | 15699269 ~ 15717250 (-) | False | LOC122329227 |
| TU234864 | other | upstream | 494964 | 17176652 ~ 17179779 (-) | False | slc48a1a |
| TU234899 | other | upstream | 657579 | 17339267 ~ 17343385 (-) | True | G158609 |
| TU235255 | other | upstream | 1364250 | 18045938 ~ 18047878 (-) | False | march9 |
| XR_006247822.1 | other | upstream | 1549955 | 18231643 ~ 18235536 (-) | False | hnrnpa1b |
| TU235534 | other | upstream | 2065703 | 18747391 ~ 18754712 (-) | True | G159076 |
