Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_043233599.1 |
| length | 1032 |
| RNA type | mRNA |
| GC content | 0.47 |
| exon number | 8 |
| gene id | aspdh |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056701.1 |
| NCBI id | CM032070.1 |
| chromosome length | 30200998 |
| location | 19917670 ~ 19921271 (+) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:0006742 | NADP catabolic process | biological_process |
| GO:0055114 | oxidation-reduction process | biological_process |
| GO:0009435 | NAD biosynthetic process | biological_process |
| GO:0050661 | NADP binding | molecular_function |
| GO:0033735 | aspartate dehydrogenase activity | molecular_function |
| id | description |
|---|---|
| K06989 | nadX, ASPDH; aspartate dehydrogenase |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU32016 | lncRNA | upstream | 7526 | 19903586 ~ 19910683 (+) | True | G21554 |
| TU32018 | lncRNA | upstream | 12556 | 19881382 ~ 19905653 (+) | False | G21554 |
| TU32021 | lncRNA | upstream | 41888 | 19873439 ~ 19876321 (+) | True | G21555 |
| TU32062 | lncRNA | downstream | 7458 | 19928729 ~ 19951931 (+) | False | G21586 |
| TU32061 | lncRNA | downstream | 26810 | 19948081 ~ 19951634 (+) | True | G21586 |
| TU32026 | lncRNA | downstream | 32805 | 19954076 ~ 19970419 (+) | True | G21558 |
| TU32079 | lncRNA | downstream | 143689 | 20064960 ~ 20065876 (+) | False | LOC122341338 |
| XR_006250469.1 | lncRNA | downstream | 239165 | 20160436 ~ 20161211 (+) | True | LOC122341550 |
| XM_043229689.1 | mRNA | upstream | 406702 | 19509088 ~ 19511507 (+) | True | nkiras2 |
| XM_043235343.1 | mRNA | upstream | 463894 | 19451411 ~ 19454315 (+) | True | si:ch73-141c7.1 |
| XM_043235344.1 | mRNA | upstream | 468547 | 19447171 ~ 19449662 (+) | True | hsd17b1 |
| XM_043235342.1 | mRNA | upstream | 472312 | 19443220 ~ 19445897 (+) | True | LOC122341749 |
| XM_043235801.1 | mRNA | upstream | 500318 | 19409591 ~ 19417891 (+) | True | rabep2 |
| XM_043233554.1 | mRNA | downstream | 9462 | 19930733 ~ 19941580 (+) | True | pold1 |
| XM_043234687.1 | mRNA | downstream | 66235 | 19987506 ~ 19998472 (+) | True | LOC122341334 |
| XM_043234688.1 | mRNA | downstream | 77222 | 19998493 ~ 19999588 (+) | True | LOC122341335 |
| XM_043234998.1 | mRNA | downstream | 88862 | 20010133 ~ 20021740 (+) | True | LOC122341548 |
| XM_043234689.1 | mRNA | downstream | 142999 | 20064270 ~ 20069253 (+) | True | LOC122341338 |
| TU31603 | other | upstream | 515033 | 19399832 ~ 19403176 (+) | False | ypel3 |
| TU31597 | other | upstream | 515033 | 19399871 ~ 19403176 (+) | False | ypel3 |
| TU31600 | other | upstream | 515033 | 19399871 ~ 19403176 (+) | False | ypel3 |
| TU31536 | other | upstream | 625868 | 19291445 ~ 19292341 (+) | True | G21213 |
| TU31520 | other | upstream | 925012 | 18991458 ~ 18993197 (+) | False | G21202 |
| TU32077 | other | downstream | 143219 | 20064490 ~ 20068001 (+) | False | LOC122341338 |
| TU32078 | other | downstream | 144859 | 20066130 ~ 20068001 (+) | False | LOC122341338 |
| TU32169 | other | downstream | 185575 | 20106846 ~ 20107836 (+) | False | LOC122341546 |
| TU32173 | other | downstream | 264296 | 20185567 ~ 20187198 (+) | False | eftud2 |
| TU32181 | other | downstream | 266257 | 20187528 ~ 20188083 (+) | False | eftud2 |
