Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_006250477.1 |
| length | 381 |
| lncRNA type | inter_gene |
| GC content | 0.51 |
| exon number | 3 |
| gene id | LOC122341620 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056701.1 |
| NCBI id | CM032070.1 |
| chromosome length | 30200998 |
| location | 13408320 ~ 13411918 (+) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU29473 | lncRNA | upstream | 44590 | 13362886 ~ 13363730 (+) | True | G19780 |
| TU29470 | lncRNA | upstream | 47985 | 13359319 ~ 13360335 (+) | True | G19777 |
| TU29468 | lncRNA | upstream | 49275 | 13358501 ~ 13359045 (+) | True | G19776 |
| TU29469 | lncRNA | upstream | 49275 | 13358647 ~ 13359045 (+) | False | G19776 |
| TU29467 | lncRNA | upstream | 49912 | 13357713 ~ 13358408 (+) | True | G19775 |
| TU29482 | lncRNA | downstream | 23976 | 13435894 ~ 13439326 (+) | True | G19788 |
| TU29498 | lncRNA | downstream | 29768 | 13441686 ~ 13442149 (+) | True | G19798 |
| TU29615 | lncRNA | downstream | 286656 | 13698574 ~ 13705402 (+) | False | rbbp6 |
| TU29624 | lncRNA | downstream | 375915 | 13787833 ~ 13792555 (+) | True | G19890 |
| TU29625 | lncRNA | downstream | 403435 | 13815353 ~ 13818222 (+) | True | G19891 |
| XM_043235109.1 | mRNA | upstream | 13357 | 13391973 ~ 13394963 (+) | True | dusp3b |
| XM_043235110.1 | mRNA | upstream | 13357 | 13391973 ~ 13394963 (+) | False | dusp3b |
| XM_043230480.1 | mRNA | upstream | 16814 | 13386428 ~ 13391506 (+) | True | dlx4a |
| XM_043235227.1 | mRNA | upstream | 238066 | 13163996 ~ 13170254 (+) | True | znf207a |
| XM_043235228.1 | mRNA | upstream | 238066 | 13163996 ~ 13170254 (+) | False | znf207a |
| XM_043235288.1 | mRNA | downstream | 50134 | 13462052 ~ 13468151 (+) | True | cdk5r1a |
| XM_043235269.1 | mRNA | downstream | 61590 | 13473508 ~ 13501419 (+) | True | itga3a |
| XM_043235267.1 | mRNA | downstream | 61590 | 13473508 ~ 13501419 (+) | False | itga3a |
| XM_043229520.1 | mRNA | downstream | 89686 | 13501604 ~ 13520389 (+) | True | ca10b |
| XM_043235209.1 | mRNA | downstream | 109297 | 13521215 ~ 13528518 (+) | True | smarce1 |
| TU29192 | other | upstream | 420407 | 12835381 ~ 12987913 (+) | True | LOC122332158 |
| unassigned_transcript_277 | other | upstream | 520259 | 12887157 ~ 12888061 (+) | False | LOC122332158 |
| XR_006250478.1 | other | upstream | 879517 | 12519837 ~ 12528803 (+) | False | gtpbp1 |
| TU28786 | other | upstream | 894599 | 12511926 ~ 12513721 (+) | False | G19326 |
| TU28787 | other | upstream | 894599 | 12511926 ~ 12513721 (+) | False | G19326 |
| TU29613 | other | downstream | 286656 | 13698574 ~ 13702353 (+) | False | rbbp6 |
| unassigned_transcript_286 | other | downstream | 501705 | 13913623 ~ 13913694 (+) | True | trnat-cgu |
| TU29734 | other | downstream | 637572 | 14049490 ~ 14053032 (+) | True | G19973 |
| TU29797 | other | downstream | 706549 | 14118467 ~ 14119570 (+) | True | G20015 |
| XR_006248644.1 | other | downstream | 843572 | 14255490 ~ 14267791 (+) | False | abcc1 |
