Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU28786 |
| length | 1519 |
| RNA type | TUCP |
| GC content | 0.39 |
| exon number | 2 |
| gene id | G19326 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_056701.1 |
| NCBI id | CM032070.1 |
| chromosome length | 30200998 |
| location | 12511926 ~ 12513721 (+) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU28700 | lncRNA | upstream | 261929 | 12246208 ~ 12249997 (+) | False | LOC122341822 |
| TU28736 | lncRNA | upstream | 283406 | 12227935 ~ 12228520 (+) | True | G19287 |
| TU28710 | lncRNA | upstream | 376969 | 12132629 ~ 12134957 (+) | True | G19274 |
| TU28698 | lncRNA | upstream | 393151 | 12118538 ~ 12118775 (+) | True | G19263 |
| TU28697 | lncRNA | upstream | 394017 | 12117343 ~ 12117909 (+) | False | pax10 |
| TU29145 | lncRNA | downstream | 167537 | 12681258 ~ 12681565 (+) | True | G19579 |
| TU29141 | lncRNA | downstream | 169097 | 12682818 ~ 12686371 (+) | True | G19575 |
| TU29234 | lncRNA | downstream | 483496 | 12997217 ~ 13056733 (+) | True | G19656 |
| TU29204 | lncRNA | downstream | 492089 | 13005810 ~ 13096854 (+) | True | G19629 |
| TU29202 | lncRNA | downstream | 546439 | 13060160 ~ 13061606 (+) | True | G19627 |
| XM_043235771.1 | mRNA | upstream | 21864 | 12477842 ~ 12490062 (+) | True | mpp2a |
| XM_043235772.1 | mRNA | upstream | 21864 | 12477842 ~ 12490062 (+) | False | mpp2a |
| XM_043235773.1 | mRNA | upstream | 34654 | 12474069 ~ 12477272 (+) | True | pyya |
| XM_043229525.1 | mRNA | upstream | 55017 | 12456009 ~ 12456909 (+) | True | hspb9 |
| XM_043233703.1 | mRNA | upstream | 196880 | 12303364 ~ 12315046 (+) | False | nbr1b |
| XM_043235143.1 | mRNA | downstream | 6116 | 12519837 ~ 12528803 (+) | True | gtpbp1 |
| XM_043235144.1 | mRNA | downstream | 6116 | 12519837 ~ 12528803 (+) | False | gtpbp1 |
| XM_043235145.1 | mRNA | downstream | 6116 | 12519837 ~ 12528803 (+) | False | gtpbp1 |
| XM_043235146.1 | mRNA | downstream | 6116 | 12519837 ~ 12528803 (+) | False | gtpbp1 |
| XM_043225909.1 | mRNA | downstream | 147960 | 12661681 ~ 12676663 (+) | False | LOC122329583 |
| XR_006249244.1 | other | upstream | 198936 | 12303364 ~ 12312990 (+) | False | nbr1b |
| TU28690 | other | upstream | 411074 | 12092603 ~ 12100852 (+) | True | LOC122342134 |
| XR_006249731.1 | other | upstream | 678002 | 11773201 ~ 11833924 (+) | True | kcnc3a |
| XR_006249728.1 | other | upstream | 678002 | 11773201 ~ 11833924 (+) | False | kcnc3a |
| XR_006249729.1 | other | upstream | 678002 | 11773201 ~ 11833924 (+) | False | kcnc3a |
| XR_006250478.1 | other | downstream | 6116 | 12519837 ~ 12528803 (+) | False | gtpbp1 |
| TU29192 | other | downstream | 321660 | 12835381 ~ 12987913 (+) | True | LOC122332158 |
| unassigned_transcript_277 | other | downstream | 373436 | 12887157 ~ 12888061 (+) | False | LOC122332158 |
| TU29613 | other | downstream | 1184853 | 13698574 ~ 13702353 (+) | False | rbbp6 |
| unassigned_transcript_286 | other | downstream | 1399902 | 13913623 ~ 13913694 (+) | True | trnat-cgu |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| grasscarp (Ctenopharyngodon idella) | TU242118 | True | 3826 | lncRNA | 0.38 | 3 | CI01000050 | 899492 ~ 903682 (-) |
| grasscarp (Ctenopharyngodon idella) | CI01000069_04599199_04600481.mRNA | True | 533 | mRNA | 0.51 | 3 | CI01000069 | 4599169 ~ 4600481 (-) |
| rainbow trout (Oncorhynchus mykiss) | TU1263140 | False | 697 | lncRNA | 0.45 | 2 | NC_048576.1 | 74785713 ~ 74786587 (+) |
| eurasian perch (Perca fluviatilis) | TU242118 | False | 1491 | lncRNA | 0.42 | 2 | NC_053128.1 | 29842666 ~ 30106722 (+) |
| striped catfish (Pangasianodon hypophthalmus) | TU242118 | True | 6497 | lncRNA | 0.37 | 3 | NC_047607.1 | 3064905 ~ 3072726 (+) |
