RNA id: TU252137


Basic Information

Item Value
RNA id TU252137
length 1465
RNA type TUCP
GC content 0.38
exon number 9
gene id LOC122331690
representative False

Chromosome Information

Item Value
chromosome id NW_025047681.1
NCBI id JAEQBD010000026.1
chromosome length 5200000
location 41422 ~ 61676 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GGAACATCCTTGCAAGGTTACCTTGGCTTTGTGACAGAACAACTCCAAGACCGATATTAGACGCATCCACCTCAAATATGAACAGCAGATCAGGATCAGGGTGTCTGTTTAACAAAACTCGGTCTATAACTAATGTGTAACAGCCTATTTCATCGACGTAATTACACACTGTAagtacaaactgttccataacttagttacatggtgTAACAGAATGGACTCAAGACAGAAGgtaagtaaaaatgtttattgtttgcGGAGGAGATCTCTGGAGTATGTGAAGACTGGTGTGAAACAGGTGATTATCTTGAGAGAGGTTTCACTGAGTAGGTCTGATTGCAAGTGCTCAGAACTCATAATCGTGATGGTGATCTCAGTGATTGGCTGGTGGATGAGCCTGGccgtacattttgttttatgtaagttgcaacggctactactaagtacttacaaGGTTAtggacatcttaaaataaaatgtttaccttAGTGACTTTTAGAATGATGTAACTCTTCTATTTGTgagaagtaactagtaactataactAATTACTTTTATGATAGGACAAATATTCTATAATAAGATAATTACAGTAGCCTTGGTACAAAAAAAGGTCTATACCAAAGCCAAAGCCAGAATAAAATTGAATGTGCCAGATGGAATATGCAGGAAGTCGCTTCAGTTTAAGAGTGAAagtaaaattgtataatttagACTGCTTACACGTTTGACTCTTCATACCTGTACAGGACAGTATACGGCGAAACAGCGCTGACGTTATCGCTGAGGTTAAGTTTGGCAGCACTTATACATTACAGATGGCTGAGAATCGCAGACTTTCTAGTGCTAGTGTTGACAGCAGTGCCACTGATCACAGCATGGATCAACCATCTAGTTTGACCAGagtgttaaaaaaacatggatACACCAAGCAGAAAGAACTTGGACAAGGGATTTCAGGAAAAGTGTTTCTGATTACTGACACAGATGGAGATCGCTATGTGGTCAAACAGATGAATTCAAGAGATAGGAAGGAGCTGGACAGAGTGCAACAGGAAATCAATATCTTGAAGAAAATAAACTTCGGATATATTGTTTCTTATGTGGATTCTTTTGAAgATAAAGAAGCTGAACTCTTTTATATTGTGATGGAGTATTGTGCAGGTGGAAATCTTAATGAAAGGATGAAAttacagaaagagagagctgTTGTTTTTGAAGAACAAGAGATTCTTGACTGGTTCGTTCAGATTTGTCTGGCACTGCAGTATATTCATGATGAGAGGAGGAATATTTTTCACAGAGATATCAGTCCTCAGAATATTTTTCTGACTGAAGATGGGTACATCAATCTAGGGGATTTTGGATACTCAAAAGTGcagaaaagagCACATTTTTATCAATGCTCAGTTAGAGGTGCAGAGCTCTATCAGAGCCCAGAAGTCGATGAGAACATGTATACTTC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
XR_006248189.1 lncRNA upstream 20370 14053 ~ 21052 (+) True LOC122331484
XR_006248268.1 lncRNA downstream 9311 68656 ~ 69227 (+) True LOC122331687
TU252143 lncRNA downstream 15955 75300 ~ 76664 (+) False LOC122331683
XR_006248269.1 lncRNA downstream 172822 232167 ~ 232680 (+) True LOC122331688
XR_006248265.1 lncRNA downstream 206116 265461 ~ 267131 (+) True LOC122331684
XR_006248266.1 lncRNA downstream 217390 276735 ~ 278406 (+) True LOC122331685
XM_043229187.1 mRNA downstream 15983 75328 ~ 77137 (+) True LOC122331683
XM_043229183.1 mRNA downstream 19193 78538 ~ 84940 (+) True LOC122331678
XM_043229179.1 mRNA downstream 31395 90740 ~ 96049 (+) False LOC122331675
XM_043229180.1 mRNA downstream 31409 90754 ~ 96049 (+) True LOC122331675
XM_043229181.1 mRNA downstream 42857 102202 ~ 105851 (+) True LOC122331676
TU252301 other downstream 989747 1049092 ~ 1059017 (+) False LOC122331460
TU252300 other downstream 995740 1055085 ~ 1059017 (+) False LOC122331460
TU252312 other downstream 1045732 1105077 ~ 1105891 (+) True G170357
TU252416 other downstream 1292331 1351676 ~ 1352642 (+) True G170431
TU252423 other downstream 1404720 1464065 ~ 1510057 (+) True G170438

Expression Profile