RNA id: unassigned_transcript_455


Basic Information

Item Value
RNA id unassigned_transcript_455
length 81
RNA type tRNA
GC content 0.58
exon number 1
gene id trnas-aga_24
representative True

Chromosome Information

Item Value
chromosome id NC_056702.1
NCBI id CM032071.1
chromosome length 29200999
location 25902105 ~ 25902185 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

gtagtcgtggccgagtggttaaggcgatggactagaaatccattggggtctcccgcgcaggttcgaatcctgccgactacg

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU46343 lncRNA upstream 84541 25817071 ~ 25817564 (+) True G31388
TU46346 lncRNA upstream 84650 25817031 ~ 25817455 (+) False G31388
TU46344 lncRNA upstream 84650 25817071 ~ 25817455 (+) False G31388
TU46335 lncRNA upstream 114204 25787380 ~ 25787901 (+) True G31380
TU46232 lncRNA upstream 216120 25680141 ~ 25685985 (+) True LOC122342771
XR_006250606.1 lncRNA downstream 14204 25916389 ~ 25917199 (+) True LOC122342592
XR_006250570.1 lncRNA downstream 259306 26161491 ~ 26163397 (+) True LOC122342452
TU46361 lncRNA downstream 534163 26436348 ~ 26436599 (+) True G31403
TU46362 lncRNA downstream 541321 26443506 ~ 26443991 (+) True G31404
TU46370 lncRNA downstream 576531 26478716 ~ 26478933 (+) True G31412
XM_043236264.1 mRNA upstream 173454 25711662 ~ 25728651 (+) True col9a3
XM_043237791.1 mRNA upstream 192468 25703831 ~ 25709637 (+) True ogfr
XM_043237792.1 mRNA upstream 192468 25703962 ~ 25709637 (+) False ogfr
XM_043236865.1 mRNA upstream 216233 25635051 ~ 25685872 (+) False LOC122342771
XM_043236137.1 mRNA downstream 72692 25974877 ~ 25977623 (+) True LOC122342357
XM_043236141.1 mRNA downstream 271009 26173194 ~ 26177618 (+) True LOC122342360
XM_043236142.1 mRNA downstream 480731 26382916 ~ 26427239 (+) True LOC122342362
XM_043236145.1 mRNA downstream 862768 26764953 ~ 26767173 (+) True LOC122342366
XM_043236148.1 mRNA downstream 1102516 27004701 ~ 27006306 (+) True LOC122342369
unassigned_transcript_454 other upstream 729 25901304 ~ 25901376 (+) True trnak-uuu_22
unassigned_transcript_453 other upstream 2222 25899803 ~ 25899883 (+) True trnas-uga_21
unassigned_transcript_452 other upstream 2565 25899459 ~ 25899540 (+) True trnas-aga_23
unassigned_transcript_451 other upstream 3376 25898657 ~ 25898729 (+) True trnak-uuu_21
unassigned_transcript_450 other upstream 4893 25897131 ~ 25897212 (+) True trnas-uga_20
unassigned_transcript_456 other downstream 266 25902451 ~ 25902532 (+) True trnas-uga_22
unassigned_transcript_457 other downstream 1775 25903960 ~ 25904032 (+) True trnak-uuu_23
unassigned_transcript_458 other downstream 2585 25904770 ~ 25904851 (+) True trnas-aga_25
unassigned_transcript_459 other downstream 4437 25906622 ~ 25906694 (+) True trnak-uuu_24
unassigned_transcript_460 other downstream 4972 25907157 ~ 25907238 (+) True trnas-uga_23