RNA id: TU80676



Basic Information


Item Value
RNA id TU80676
length 345
RNA type TUCP
GC content 0.47
exon number 2
gene id G54377
representative True

Chromosome Information


Item Value
chromosome id NC_056705.1
NCBI id CM032074.1
chromosome length 41700998
location 19311648 ~ 19312124 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


GGGCGTTTCTAGGACAACGactcacaaacaaacaagtgtGGCGCTTcctattttgtttagtttgaaacAAAACCATTTATATCGCAAAGTCGACGGACCTCCATTACACCTGAGGAATGTCTTTCATGAGCCAGCAGCGCAACATCTCTCACAAACACCATCAAAAGATGATCCTGGAGTACCGCAGACAGGAGGACGTGCGTGAAGATCAAACCAAACGCATCGCCAAAGAGAGGCAGCTACAAGCCAACATCCAGTGCGAAGAGAGAGTCGAGAAAAAGCGCTTTCTGCGCCGAATGCAAGATGAAGAGTATGGCAAACAAATCGAGGAATCACTTCTCAAGG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU80610 lncRNA downstream 20482 18900699 ~ 19291166 (-) False G54330
TU80615 lncRNA downstream 21011 18897517 ~ 19290637 (-) True G54331
TU80619 lncRNA downstream 21011 18897517 ~ 19290637 (-) False G54331
TU80668 lncRNA downstream 42981 19268026 ~ 19268667 (-) False G54369
TU80667 lncRNA downstream 48895 19260958 ~ 19262753 (-) True G54369
TU80697 lncRNA upstream 75862 19387986 ~ 19397242 (-) True G54391
TU80698 lncRNA upstream 75862 19387986 ~ 19396336 (-) False G54391
TU80693 lncRNA upstream 93025 19405149 ~ 19411593 (-) True anp32a
TU80723 lncRNA upstream 237563 19549687 ~ 19549902 (-) True G54414
TU80724 lncRNA upstream 238314 19550438 ~ 19550650 (-) True G54415
XM_043243507.1 mRNA downstream 245376 19062394 ~ 19066272 (-) False LOC122348212
XM_043243503.1 mRNA downstream 246945 19062394 ~ 19064703 (-) False LOC122348212
XM_043243500.1 mRNA downstream 246969 19062394 ~ 19064679 (-) False LOC122348212
XM_043243504.1 mRNA downstream 246973 19062394 ~ 19064675 (-) False LOC122348212
XM_043243506.1 mRNA downstream 247048 19062394 ~ 19064600 (-) False LOC122348212
XM_043243355.1 mRNA upstream 11662 19323786 ~ 19358783 (-) True itga11a
XM_043243881.1 mRNA upstream 93026 19405150 ~ 19409883 (-) False anp32a
XM_043243985.1 mRNA upstream 239996 19552120 ~ 19578075 (-) False tle3b
XM_043244000.1 mRNA upstream 239996 19552120 ~ 19578074 (-) False tle3b
XM_043243999.1 mRNA upstream 239996 19552120 ~ 19578074 (-) False tle3b
TU80624 other downstream 396727 18913255 ~ 18914921 (-) False LOC122348206
TU80606 other downstream 438508 18846276 ~ 18873140 (-) True G54330
TU80561 other downstream 517441 18788232 ~ 18794207 (-) False G54312
TU80535 other downstream 641905 18667706 ~ 18669743 (-) False LOC122349446
TU79785 other downstream 2426124 16881893 ~ 16885524 (-) False G53797
XR_006251373.1 other upstream 423181 19735305 ~ 19769405 (-) False map2k5
TU81046 other upstream 682938 19995062 ~ 20001646 (-) True G54637
TU81111 other upstream 966728 20278852 ~ 20280806 (-) False G54687
TU81333 other upstream 1752809 21064933 ~ 21068375 (-) True G54872
TU81735 other upstream 2740672 22052796 ~ 22056245 (-) True G55165

Expression Profile