G55165 (cd59,LOC107560108,LOC107736732,LOC107677235,LOC107722399,LOC107554602)


Basic Information

Item Value
gene id G55165
gene name cd59,LOC107560108,LOC107736732,LOC107677235,LOC107722399,LOC107554602
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056705.1
NCBI id CM032074.1
chromosome length 41700998
location 22052796 ~ 22056245 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU81735
ATACATCAGACATGTGGTCTTTTCATGCcagatcatttaaaatcacaatttgttgAACACCAGTGTATGTTTAATAGTCCTTTTTGTCTACACgtcaGCAGAATGGTGTTCAAGCACAACAGATTTATTGAGGAGCGTTGTGGGCGTGTTTAGGAAAGCGTAAGGGGCTCAAGCTCTCCAGTTTTCAGACTGGTTTGGATGTGTCTGTGGTTGGATACTTTCTTCACACTGGGATTAGTCTGGTAAACCGAAGGCATTATGAAAGCTTCTGttggagtgtgtgtggtgttcgTTCTGGCTCTGGTGGGGCTTGGCTCTGCCATCAAATGTTACAGTTGTAAGGACTACACGGGCACATGCTCTAAAATTCGGAACTGCTACTATGATGATGCCTGTGTGTCCGTCTACGAGAGAGgcGGTGACACGTACAGGCAGTGTATAAAGTATTCTGATTGTAACTACAACGTAATCGGCGAGAAATTTCCCAAACTTTCCAGCTTCAAGTTCTCCTGCTGTACCAGTGACCTGTGTAACACAGCACCCGTGTCCGTGTCCAGTCGCTCTGTGGTGGGAATACTGCTCTCGCTAGCACTCTTCTGGTGGGGTGTTCTCTAAAACGCTTCTGCATTGTTCCTTGCAAAGCTGGCAGTGGTATCATGCAGAGAGAATGCAGAGATCTTCTATATCTTGATTTAAGTGGTCAAAGAAGCATTCACAGCTTAAATCTCAGCTGTATGTTAAAACTGCGTGTGCTCACTGCTAAAGCTTATAAGCTAAAGCttgtatgttttgattttttgcaCTTAATAGTGAAAGGGAAACCATCtgaatataatttatagtaTTCGGTGCTGCTTTATGTAAGTTATGTGTACTTTTTCGCGGCTAATCCTGTTACCCAGAAAAGGGGCACGACTGAGTGGGTTACGAGGGATGCTGACATTTTCAAAGGGTTAATGTATCatcaacattttcataaaaacccTTTACGCCTGCTTTTCCACTGCCTTGTTTACGAATGTCtcttttaaaacgtaaaatctCTTGAAAAACATTGCGTGCAATATGTAGACATGTAGTCTTTTCAGTGTGCTGATTAGCTTCTTGTTACCACGATAGCCAGCGAAACTTACCTTTACCTACGAACCTTTATGTGACCAATAAAAGGAACATGCACTTTTATGCAAATTAAGAGTTTGAGAATtctgttaaatatttacaacGATTCCTCGTATATAGCTGTCAGCTGGAGCTGGTTTAAAATTTGAGGTATGTGATTTatgttgtaaaacaaaatgtgttgtcTCTTCAGCTAATGTTAACCAAAGTACTCAACCAGTAGACAAAAcccacagtgaaaaaaaaaataggcctaGGGTGTTTAACAGGCATGACTAACAAGTATGTTACCCTGTTATTTATAACCATTATTTATGTGCtttgtttcagtattttttttcttctggaagttaattattataattaatagtTCTTTGTCAATatgacacaaataaatgttttttggccattcc
>TU81736
ATACATCAGACATGTGGTCTTTTCATGCcagatcatttaaaatcacaatttgttgAACACCAGTgtcaGCAGAATGGTGTTCAAGCACAACAGATTTATTGAGGAGCGTTGTGGGCGTGTTTAGGAAAGCGTAAGGGGCTCAAGCTCTCCAGTTTTCAGACTGGTTTGGATGTGTCTGTGGTTGGATACTTTCTTCACACTGGGATTAGTCTGGTAAACCGAAGGCATTATGAAAGCTTCTGttggagtgtgtgtggtgttcgTTCTGGCTCTGGTGGGGCTTGGCTCTGCCATCAAATGTTACAGTTGTAAGGACTACACGGGCACATGCTCTAAAATTCGGAACTGCTACTATGATGATGCCTGTGTGTCCGTCTACGAGAGAGgcGGTGACACGTACAGGCAGTGTATAAAGTATTCTGATTGTAACTACAACGTAATCGGCGAGAAATTTCCCAAACTTTCCAGCTTCAAGTTCTCCTGCTGTACCAGTGACCTGTGTAACACAGCACCCGTGTCCGTGTCCAGTCGCTCTGTGGTGGGAATACTGCTCTCGCTAGCACTCTTCTGGTGGGGTGTTCTCTAAAACGCTTCTGCATTGTTCCTTGCAAAGCTGGCAGTGGTATCATGCAGAGAGAATGCAGAGATCTTCTATATCTTGATTTAAGTGGTCAAAGAAGCATTCACAGCTTAAATCTCAGCTGTATGTTAAAACTGCGTGTGCTCACTGCTAAAGCTTATAAGCTAAAGCttgtatgttttgattttttgcaCTTAATAGTGAAAGGGAAACCATCtgaatataatttatagtaTTCGGTGCTGCTTTATGTAAGTTATGTGTACTTTTTCGCGGCTAATCCTGTTACCCAGAAAAGGGGCACGACTGAGTGGGTTACGAGGGATGCTGACATTTTCAAAGGGTTAATGTATCatcaacattttcataaaaacccTTTACGCCTGCTTTTCCACTGCCTTGTTTACGAATGTCtcttttaaaacgtaaaatctCTTGAAAAACATTGCGTGCAATATGTAGACATGTAGTCTTTTCAGTGTGCTGATTAGCTTCTTGTTACCACGATAGCCAGCGAAACTTACCTTTACCTACGAACCTTTATGTGACCAATAAAAGGAACATGCACTTTTATGCAAATTAAGAGTTTGAGAATtctgttaaatatttacaacGATTCCTCGTATATAGCTGTCAGCTGGAGCTGGTTTAAAATTTGAGGTATGTGATTTatgttgtaaaacaaaatgtgttgtcTCTTCAGCTAATGTTAACCAAAGTACTCAACCAGTAGACAAAAcccacagtgaaaaaaaaaataggcctaGGGTGTTTAACAGGCATGACTAACAAGTATGTTACCCTGTTATTTATAACCATTATTTATGTGCtttgtttcagtattttttttcttctggaagttaattattataattaatagtTCTTTGTCAATatgacacaaataaatgttttttggccattcc

Function

symbol description
cd59 Enables lipopolysaccharide binding activity and lipoteichoic acid binding activity. Acts upstream of or within defense response to Gram-negative bacterium and defense response to Gram-positive bacterium. Located in membrane. Is expressed in several structures, including blood; central nervous system; hypochord; ovary; and unfertilized egg. Human ortholog(s) of this gene implicated in colorectal carcinoma and ovarian cancer. Orthologous to human CD59 (CD59 molecule (CD59 blood group)).

NR:

description
PREDICTED: CD59 glycoprotein-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU81735 True 1532 TUCP 0.40 5 22052796 22056245
TU81736 False 1503 TUCP 0.40 5 22052796 22056245

Neighbor

gene id symbol gene type direction distance location
aplnr2 aplnr2,LOC107657145,LOC107758451,LOC107554601,LOC107722398,LOC107677393,LOC107706925,LOC107560106 coding downstream 2156 22047902 ~ 22050640 (-)
c6ast1 NA coding downstream 14659 22030321 ~ 22038137 (-)
LOC122348456 LOC107657143,LOC107758450,LOC107554600,LOC107722401,LOC107560096,LOC107677258,LOC107758449 coding downstream 29195 22018507 ~ 22023601 (-)
LOC122348458 LOC107657143,LOC107758450,LOC107722401,LOC107554600,LOC107758449 coding downstream 37890 22011143 ~ 22014906 (-)
LOC122347948 LOC107560096,LOC107722401,LOC107677258,LOC107758449 coding downstream 46743 22004630 ~ 22006053 (-)
atg13 atg13,LOC107677120,LOC107722374,LOC107703285,LOC107554630 coding upstream 49316 22105561 ~ 22114501 (-)
phf21aa LOC107722426,LOC107560114,LOC107656174,LOC107703284,LOC107742561,LOC107554634 coding upstream 65613 22121858 ~ 22141854 (-)
chrm4a chrm4a,chrm4,LOC107742565,LOC107722408,LOC107554636,LOC107560117 coding upstream 231082 22287327 ~ 22300473 (-)
ambra1a LOC107722385,LOC107656180,LOC107560119,LOC107703290 coding upstream 259526 22315771 ~ 22380504 (-)
snx1b snx1b,LOC107703294,LOC107560120,LOC107722395,LOC107656183,LOC107742568 coding upstream 332261 22388506 ~ 22395720 (-)
G55065 NA non-coding downstream 263403 21788750 ~ 21789393 (-)
G54978 NA non-coding downstream 554815 21497615 ~ 21497981 (-)
G54977 NA non-coding downstream 555296 21497213 ~ 21497500 (-)
G54976 NA non-coding downstream 555749 21496691 ~ 21497047 (-)
G54971 NA non-coding downstream 595826 21456714 ~ 21456970 (-)
G55189 NA non-coding upstream 26231 22082476 ~ 22082840 (-)
G55190 NA non-coding upstream 26719 22082964 ~ 22083293 (-)
G55194 NA non-coding upstream 30389 22086634 ~ 22087088 (-)
G55191 LOC107703282,LOC107742559,LOC107677184,LOC107554629,LOC107560109 non-coding upstream 31101 22087346 ~ 22088752 (-)
G55193 NA non-coding upstream 33217 22089462 ~ 22090498 (-)
cebpa cebpa,LOC107722391,LOC107696713,LOC107551484,LOC107733057,LOC107657126,LOC107580367 other downstream 299358 21653321 ~ 21753438 (-)
G54872 LOC107713054,LOC107550285,LOC107657115 other downstream 984421 21064933 ~ 21068375 (-)
G54687 NA other downstream 1771990 20278852 ~ 20280806 (-)
G54637 rfx7,LOC107689974,LOC107740453,LOC107563480,LOC107664392,LOC107755110,LOC107553094 other downstream 2051150 19995062 ~ 20001646 (-)
tex9 tex9 other downstream 2075515 19973261 ~ 19977281 (-)
si:dkey-23n7.10 si:dkey-23n7.10,LOC107560112,LOC107742582,LOC107554633,LOC107722376,LOC107703276 other upstream 46669 22102914 ~ 22105329 (-)
LOC122347949 LOC107560124,LOC107722378,LOC107656186,LOC107554594,LOC107742573 other upstream 376155 22432400 ~ 22440439 (-)
otog LOC107722353,LOC107656169,LOC107591037,LOC107703275,LOC107742581,LOC107554595 other upstream 387553 22443798 ~ 22488923 (-)
wdr97 LOC107722359,LOC107591040,LOC107684931 other upstream 713387 22769632 ~ 22779326 (-)
nom1 nom1,LOC107724412,LOC107684778,LOC107653288,LOC107742133 other upstream 994945 23051190 ~ 23058781 (-)

Expression


Co-expression Network