nom1 (nom1,LOC107724412,LOC107684778,LOC107653288,LOC107742133)


Basic Information

Item Value
gene id nom1
gene name nom1,LOC107724412,LOC107684778,LOC107653288,LOC107742133
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056705.1
NCBI id CM032074.1
chromosome length 41700998
location 23051190 ~ 23058781 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043245802.1
TACTGGAGTAACCTCTAACGAAGAAGTGACATCAATGGCGGCCTCCGGCTTCTAcatgtgttgttttttctgaTCACTTTCACGGGACAATTCGCGATAAACACgtaaccaataaataaatattatctgCACAGCTAGATATACCTCACTAATGAAATGAAGGCAAAGGCGCAGCGCAAGGGCAGAGGGAAAGCTGAAAAGCAAGCAAACAGGGACAAACTGCAGAAGTTTAAGGATTCGGTTAAAGACTTCGTGAAGAGCAAAGGCGGCTTCGGTGAAAATGAAACGGACCAAAGAGGATTATTCGTAAAGAGGAAAAGCAGGAAAGAGCTGCGCAAAGAGAAACGTAAGTTAAAGAAAGCCAAAAAGAAGTGCCACCACATGGGTCCGTCCCTGCAGAGCCCCAGCGAGGAGCCCGCTCCAGAAACCCCCGAAAAGACACAGGAACCGGCCCTGAAGACCACCGGGAACCTTAAAAAGACCGCTCAGAAACAGCAGGAGGCAGGTAAAGACACTGTTAATAACGAAGAAGGGACCACAAAAAGGAAAGTGCGCTTCTCCGAAGACCtgccaaaacaaagaaagaagtcTAGTCTGAACGAGGGCAGAAAGCGGTCTCTGTTAGAGGCCAATATCGAAGAagacaaagaaataaagagGTTGGAGAAACGCCTTGGgatgaataaaagaaagaacaaaagtaGTCTGCCCCTGTCGTTCACCAACGATGGGCTCGATTACATTTTAGGGATTCTTGAGCCTGGGGCGTCTGCCACGGGGCTGTATGAGAGTGATGAAGAAATGGACCTCGATGGAGCTAAGGGTGACTTTGATGAGCTGGACGAGGACAGCGACGGGCAGATGACAGATGATGAGAACCAGGAAGAGAGTGAGGGTGAAGAGGAGAGAGACGGAGGGGATGAGGATGCACAGACGGGAGAAGAGGAAGATGTAGAAGATGACAACCAGATAGAAGATGAGGtggaaggagaaggagaagaggaagaggccGATGCATCAGAGGAAAGTGATGATGGGGAGGAAGCTGACTCTGAACATGAAACACCTGAAAGCCAGGAGCCTAGTCCTACCGCAGCAGGTAAATATGTTCCCCCTCACTTACGAGAAACCATGGACAGCAAACGCAGAGCTGAGCTGGAGAAACTGAGGCGCACTGTGAAAGGTCTGATGAACAGATTGAGTCAGCCCAACATGGCATCCATCAGCGGTCAGCTGGAAGAGCTGTACATGAGCACCAGCAGGAAAGACATGAACGAAACGCTCACTGACGTTCTGCTGGCTGCCTGCGTCACACCTGCTCTCATGCCCGAAAGGCTTTTAATGGAGCACATCCTTCTTGTCAGTGTCCTTCACTATAGTGTTGGCCTGGAGGTTGGAGCTCATTTTCTGGAGACTGTAGTCCGTCGGTTTGATAAAACCTACAGTCAGCTTGACGCTACGGACAAAGAATGTGACAACTTGGTGTCCATGCTCGCCCACCTCTACAACTTCCACGTGGTCCATGCTCTCCTGGTGTTTGACATTCTGAAGAAGCTGGTGACACGATTCAGCGCGAAGGACGTAGAACTGGTTCTGCTGGTGCTGAAGAACGTTGGCTTCGCTCTCAGAAAGGATGATCCGCTAGCTCTTAAGGAGCTGATCTCTGAGGCTCAGCGGAAAGCCGGCGCTGAAGGAGAGCGTTTTCACGACCAAACGAGGATTCGGTTTATGTTGGAGACTATGCTGGCGCTAAAGAACAATGACATGAGGAAGATTCCAGGTTATGACCCTGAACCTCTGGAGAATTTAAGAAAACTGCAAAGGACTTTGATTCACAACAGCGCCAGTGGAAGTGACATGAAGCTGAGAGTCTCGCTAGACAATCTTCTGGAAGCGGAGCGTGTTGGCCGTTGGTGGATCGTAGGATCTTCCTGGAGTGGAGCACCCATGATCGATGACCAAGAAAACAAGACGACTACCCCATCCGCCAAAGGGGAACAATACAGTGCAAAGATGTTGGAGCTTGCACGTAAACAAAGAATGAACACTGACATCAGGAGGAACATTTTCTGTGTGCTTATGTCAAGTGAAGACTATTTAGATGCCTTTGAGAAACTTTTAAGGTTAGGATTGAAGGACCAGCAAGAGCGGGAAATTGTTCATGTTTTGATGGACTGCTGcctgcaagagaaaatgttcAATAGGTTCTATGCGGTTCTGGCAGAGAAGTTTTGCTCCCATGACCGGCGGTTCCAGatGACTATGCAGTTCAGTCTGTGGGACAAGTTCAAAGACCTGGCAAATCTTTCCAGCCGGTCCTTCAGTAACCTGGTCCTGCTGGTCACTCATCTTCTACACAGGAAGTGTCTGTCTCTTTCCATTCTTAAGGCGATTGAGTTTGGGGAGCTGGATAAACCCAAAGTCAAATTTTTGAAGCAGGTTCTCACAAAAATTCTTAAGGAAACTGAGCCAGAAGATCTTGTGAATATATTTGGCAGGATCTCTGGAATCCCCAAGCTGGGAATGCTTCGGGAAGGCTTGAAGCTTTTCATCAGCCACTTTCTGCTTCGGAACATCCAGACTGAAGAAACCGAGCAGGCCAAGGTACTCAAGGATAGAGCTGAGGTCGCCGCCAGAGCCATGGAGGCCCGGGATGCCAAAATTAAGCTATAGAGCTCTTGCACAAAGAAATGTGTGCATAATGCATCGGACTCAAAAAGTGAGAATTGCTATTCAAAACCTGTATGCAGACCTTACGACACATGCAGATCACTGActtgcatttttgtattaattctgcattctgtaaaaataaaacgtaaaatatgtttatttataagtttataaataaatttaagtttgttttaaagaattaCATACTATGACATTTCAACTTTTATTTactagaaattaaaaaaaaaaaaattaaatgatctta
>XR_006251478.1
TACTGGAGTAACCTCTAACGAAGAAGTGACATCAATGGCGGCCTCCGGCTTCTAcatgtgttgttttttctgaTCACTTTCACGGGACAATTCGCGATAAACACgtaaccaataaataaatattatctgCACAGCTAGATATACCTCACTAATGAAATGAAGGCAAAGGCGCAGCGCAAGGGCAGAGGGAAAGCTGAAAAGCAAGCAAACAGGGACAAACTGCAGAAGTTTAAGGATTCGGTTAAAGACTTCGTGAAGAGCAAAGGCGGCTTCGGTGAAAATGAAACGGACCAAAGAGGATTATTCGTAAAGAGGAAAAGCAGGAAAGAGCTGCGCAAAGAGAAACGTAAGTTAAAGAAAGCCAAAAAGAAGTGCCACCACATGGGTCCGTCCCTGCAGAGCCCCAGCGAGGAGCCCGCTCCAGAAACCCCCGAAAAGACACAGGAACCGGCCCTGAAGACCACCGGGAACCTTAAAAAGACCGCTCAGAAACAGCAGGAGGCAGGTAAAGACACTGTTAATAACGAAGAAGGGACCACAAAAAGGAAAGTGCGCTTCTCCGAAGACCtgccaaaacaaagaaagaagtcTAGTCTGAACGAGGGCAGAAAGCGGTCTCTGTTAGAGGCCAATATCGAAGAagacaaagaaataaagagGTTGGAGAAACGCCTTGGgatgaataaaagaaagaacaaaagtaGTCTGCCCCTGTCGTTCACCAACGATGGGCTCGATTACATTTTAGGGATTCTTGAGCCTGGGGCGTCTGCCACGGGGCTGTATGAGAGTGATGAAGAAATGGACCTCGATGGAGCTAAGGGTGACTTTGATGAGCTGGACGAGGACAGCGACGGGCAGATGACAGATGATGAGAACCAGGAAGAGAGTGAGGGTGAAGAGGAGAGAGACGGAGGGGATGAGGATGCACAGACGGGAGAAGAGGAAGATGTAGAAGATGACAACCAGATAGAAGATGAGGtggaaggagaaggagaagaggaagaggccGATGCATCAGAGGAAAGTGATGATGGGGAGGAAGCTGACTCTGAACATGAAACACCTGAAAGCCAGGAGCCTAGTCCTACCGCAGCAGGTAAATATGTTCCCCCTCACTTACGAGAAACCATGGACAGCAAACGCAGAGCTGAGCTGGAGAAACTGAGGCGCACTGTGAAAGGTCTGATGAACAGATTGAGTCAGCCCAACATGGCATCCATCAGCGGTCAGCTGGAAGAGCTGTACATGAGCACCAGCAGGAAAGACATGAACGAAACGCTCACTGACGTTCTGCTGGCTGCCTGCGTCACACCTGCTCTCATGCCCGAAAGGCTTTTAATGGAGCACATCCTTCTTGTCAGTGTCCTTCACTATAGTGTTGGCCTGGAGGTTGGAGCTCATTTTCTGGAGACTGTAGTCCGTCGGTTTGATAAAACCTACAGTCAGCTTGACGCTACGGACAAAGAATGTGACAACTTGGTGTCCATGCTCGCCCACCTCTACAACTTCCACGTGGTCCATGCTCTCCTGGTGTTTGACATTCTGAAGAAGCTGGTGACACGATTCAGCGCGAAGGACGTAGAACTGGTTCTGCTGGTGCTGAAGAACGTTGGCTTCGCTCTCAGAAAGGATGATCCGCTAGCTCTTAAGGAGCTGATCTCTGAGGCTCAGCGGAAAGCCGGCGCTGAAGGAGAGCGTTTTCACGACCAAACGAGGATTCGGTTTATGTTGGAGACTATGCTGGCGCTAAAGAACAATGACATGAGGAAGATTCCAGGTTATGACCCTGAACCTCTGGAGAATTTAAGAAAACTGCAAAGGACTTTGATTCACAACAGCGCCAGTGGAAGTGACATGAAGCTGAGAGTCTCGCTAGACAATCTTCTGGAAGCGGAGCGTGTTGGCCGTTGGTGGATCGTAGGATCTTCCTGGAGTGGAGCACCCATGATCGATGACCAAGAAAACAAGACGACTACCCCATCCGCCAAAGGGGAACAATACAGTGCAAAGATGTTGGAGCTTGCACGTAAACAAAGAATGAACACTGACATCAGGAGGAACATTTTCTGTGTGCTTATGTCAAGTGAAGACTATTTAGATGCCTTTGAGAAACTTTTAAGGTTAGGATTGAAGGACCAGCAAGAGCGGGAAATTGTTCATGTTTTGATGGACTGCTGcctgcaagagaaaatgttcAATAGGTTCTATGCGGTTCTGGCAGAGAAGTTTTGCTCCCATGACCGGCGGTTCCAGatGACTATGCAGTTCAGTCTGTGGGACAAGTTCAAAGACCTGGCAAATCTTTCCAGCCGGTCCTTCAGTAACCTGGTCCTGCTGGTCACTCATCTTCTACACAGGAAGTGTCTGTCTCTTTCCATTCTTAAGGCGATTGAGTTTGGGGAGCTGGATAAACCCAAAGTCAAATTTTTGAAGCAGGTTCTCACAAAAATTCTTAAGGAAACTGAGCCAGAAGATCTTGTGAATATATTTGGCAGGATCTCTGGAATCCCCAAGCTGGGAATGCTTCGGGAAGGCTTGAAGCTTTTCATCAGCCACTTTCTGCTTCGGAACATCCAGACTGAAGAAACCGAGCAGGCCAAGGTACTCAAGGATAGAGCTGAGGTCGCCGCCAGAGCCATGGAGGCCCGGGATGCCAAAATTAAGCTATAGAGCTCTTGCACAAAGAAATGTGTGCATAATGCATCGGACTCAAAAAGTGAGAATTGCTATTCAAaagccAAAAACATGCCTCAAGCAGAAAAAGATAATAACATAATTCTTTCCCTGCTCATTAATTTCTTATGCACACATTTAGTTTCGATTCATCCTCTGACTTTTATAATCAGTGTCTTACACCGTATAAACAATGCTGTATGAACCTCATTCAGAAAGAGCACAAGGATGCGTTGCTCTCTGAAAGGTAGGTTGACTGCAGTCCTCTGGAGTATCTGCACATGCAGCAGTGCTCCGGACAAGAGTCACGTGACCGACTAGCATAACATAGCAGAGGGTTACCGTTACATTTGATGTCCTTTGTTAATTCATTAGCAACATCGACATCATGGAGTGACCATCATCTAGGGGTCAGGCAGCGGAAACATCACCCTCGCAGATCCACAACAAAAGAGCTAACCgtttcattaaatctgattgATTAAACCTTATTGCGTGCCTCAATGTCACCTCACACAGACTGTCACATTAGAACCTGTAACGACGACACAACAGTCTGGCTGGTTTTTTCTCACAGTTTCAAAGCTGGTTACCTACAGATGCCCCGCTTTTACACCCTTTGACAAAGACAACATTGTCACCACATGTGAAGAGAAGCGTATAATGGGGGTCCAGCCCACTAAGATAAACACAGGTGATTGTAAAGAGTGTGTGCCATTGTCTGTCCGCGTGAGACCAGAGGAAGGTTGATGCTGACCCCAGTTTGAACTGGTAATAGGAAGTAAAGTTGTCTTGCAACTGATAAGGCCACCGTTAAAGCACTGTTTGTGAGGATATCGCATGTTCCTAATGCGAAGACCATGGGacttagtgttttgttttttaattcaatgttgGCTTGATCTTTCACGTCTTCATGTGCAGGAGTCTCAGGTTTATCCGGGGTTTATGATGCATTTATGTCTCACCTTTCACTCGTCTCATCCAGGCCTTCACGTAAGTGTCCCACCCTGCTCACTTGTGTGTGGTTTCTTTCCCGATCATTAAAGGCTGGCGGTAGCACTGATAAGGTCGAGTTCTTTGTACTTGTGCAGCTGGGTAAACGTACAGGTATGGGGTAAATTAGGCATTAGTTAAATCAGGAACTGTTTTTCTAAATGTACTACTTTTTTAAGGCCAGATCAATTCTGTAATTAAATTtagtgttgcatttatttaaacttttttcatatttatggcAGTAGTTGTTATAACATTCTAACCTATTACTACCCCGCTAGCCTTTTAGAATTCAAGAGTAAAGCAAAGGTTAACAGATTAGCCGTGATTTTTAGTTTCTGCACGATTCGCTCAGTCGCTTAACAGGACTGGTAAATTGTTTTAGACTGATTAAAAGGGGTTCCGCAGCTTATTAtgcta

Function

symbol description
nom1 Predicted to enable RNA binding activity. Acts upstream of or within ribosome biogenesis. Predicted to be active in nucleolus. Is expressed in brain; intestine; liver; and pancreas. Orthologous to human NOM1 (nucleolar protein with MIF4G domain 1).

NR:

description
nucleolar MIF4G domain-containing protein 1

GO:

id name namespace
GO:0003723 RNA binding molecular_function

KEGG:

id description
K17583 NOM1; nucleolar MIF4G domain-containing protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043245802.1 False 2938 mRNA 0.46 12 23052743 23058781
XR_006251478.1 True 4095 transcript 0.46 13 23051190 23058781

Neighbor

gene id symbol gene type direction distance location
ube3c ube3c,LOC107684811,LOC107556065,LOC107653289,LOC107724408,LOC107591004,LOC107742134 coding downstream 8689 23018379 ~ 23042501 (-)
dnajb6b dnajb6b,LOC107684822,LOC107653290,LOC107556066,LOC107724407,LOC107742135,LOC107591005 coding downstream 37747 22993209 ~ 23013443 (-)
dync2i1 LOC107556069,LOC107739348,LOC107591041,LOC107683362 coding downstream 259469 22779958 ~ 22791721 (-)
shrprbck1r shrprbck1r,LOC107722400,LOC107656201,LOC107590993,LOC107739381,LOC107556071,LOC107653293 coding downstream 292659 22747024 ~ 22758531 (-)
grpel1 grpel1,LOC107722418,LOC107590998,LOC107656173,LOC107739410,LOC107556074 coding downstream 439192 22608958 ~ 22611998 (-)
rnf32 rnf32 coding upstream 26173 23084954 ~ 23096105 (-)
rbm33a rbm33,LOC107724401,LOC107684887 coding upstream 90165 23148946 ~ 23183718 (-)
en2a LOC107742144,LOC107659441,LOC107724415,LOC107598710,LOC107684735 coding upstream 148814 23207595 ~ 23210525 (-)
insig1 insig1,LOC107724405,LOC107591013,LOC107684749,LOC107659442,LOC107598709 coding upstream 163207 23221988 ~ 23227599 (-)
htr5ab htr5ab,htr5a,LOC107684958,LOC107591053,LOC107659435,LOC107742155,LOC107598724,LOC108412811,LOC103024346 coding upstream 239338 23298119 ~ 23308773 (-)
G55409 NA non-coding downstream 257939 22793033 ~ 22793251 (-)
G55357 NA non-coding downstream 456360 22594620 ~ 22594830 (-)
G55353 NA non-coding downstream 456649 22588277 ~ 22594541 (-)
G55331 NA non-coding downstream 478411 22546955 ~ 22572779 (-)
G55345 NA non-coding downstream 504665 22546032 ~ 22546525 (-)
G55470 NA non-coding upstream 677 23059458 ~ 23062957 (-)
G55524 NA non-coding upstream 169278 23228059 ~ 23228734 (-)
G55697 LOC107684714,LOC107724393,LOC107598708,LOC107742128,LOC107659444 non-coding upstream 284682 23343463 ~ 23772937 (-)
G55710 NA non-coding upstream 348347 23407128 ~ 23408712 (-)
G55698 puf60a,puf60,LOC107591014,LOC106568618,LOC102778806 non-coding upstream 707638 23766419 ~ 23770102 (-)
wdr97 LOC107722359,LOC107591040,LOC107684931 other downstream 271864 22769632 ~ 22779326 (-)
otog LOC107722353,LOC107656169,LOC107591037,LOC107703275,LOC107742581,LOC107554595 other downstream 562267 22443798 ~ 22488923 (-)
LOC122347949 LOC107560124,LOC107722378,LOC107656186,LOC107554594,LOC107742573 other downstream 610751 22432400 ~ 22440439 (-)
si:dkey-23n7.10 si:dkey-23n7.10,LOC107560112,LOC107742582,LOC107554633,LOC107722376,LOC107703276 other downstream 945861 22102914 ~ 22105329 (-)
G55165 cd59,LOC107560108,LOC107736732,LOC107677235,LOC107722399,LOC107554602 other downstream 994945 22052796 ~ 22056245 (-)
G55732 htr5ab,LOC107684958,LOC107591053,LOC107742155,LOC107659435,LOC107598724 other upstream 677258 23736039 ~ 23741133 (-)
rrad rrad,LOC107728691,LOC107564552,LOC107725029 other upstream 2362834 25421615 ~ 25423593 (-)
ciao2b fam96b,LOC107681502,LOC107673764 other upstream 2366863 25425644 ~ 25428025 (-)
si:ch211-260e23.7 si:ch211-260e23.7,LOC107736736,LOC107562536,LOC107698628 other upstream 2795999 25854780 ~ 25857238 (-)
hsd17b12b hsd17b12b,dh12b,LOC107701268,LOC107757588,LOC107600455,LOC107695363,LOC107730274 other upstream 4722877 27781658 ~ 27825021 (-)

Expression


Co-expression Network