rnf32 (rnf32)


Basic Information

Item Value
gene id rnf32
gene name rnf32
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056705.1
NCBI id CM032074.1
chromosome length 41700998
location 23084954 ~ 23096105 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043244041.1
atgacacattttttcattattattcctTTGGTCAagataagaaaaatatgttttttatctATTGCTGAGACTGGAACAGGAAGGTTGTTCTTGGTTGCGGTTGTAATTACAGTGTCCATAAACCTGACGTGATAGTTTCTTCATTTATTGAGACCAATAATTATTCATGAATGCAAACATAACTCATTTTAGACCTCATAGCAAGtgttttaaaaacgtattttaaaagtatttccaCCATTCACTTCATCCCTTCTAATCAGATACATTGACAACCAGTAAAAACTAGTCGAGTTCGTGGGAACGTCACACTGCGTTGAATGGAGCTTCGTTGCGTAGCGACCGAGTAAACAGTGTTTCTGTGGACAGCTATGCCGCGGGGATTCGGCTGTAAAGCAGAGCGCGGGAGGCTGACTCTAGCAGCTGTAGCACTACAGGACCATATCACACGACGCGTTCTCGTTCGAAACATTCCCCGTAACCTCCCCGTATCAGACGCTTCCTGTGGGGCTGCACATGTTAGTAGGAGGCACAGAAATCACAACACAAGGCAGAGCATCATATGCCCTGAGCAGACACAAGGACAAGAGGAGAGAGAGTATGTGCTGGATCATGGCCCTCCACCTCTGACTCTTGCCCAAAGGATGGGTTTGGTGGCAGCTCCTTCAAGAAGACTAACCGCAGAGGAATGGGCAGAGGTCAAAACCAGGTCCATCCAGGAGGGAGACTCAACCCAGCCCTGCGTGATATGCAGAGAGGAGTTTCGCCTGCAACCGCAGGTTCTACTCTCCTGTTCTCATGTATTTCACAAAGTGTGTCTGAAGTCTTTTGAGAAGTTCTCAGGCAGGAAGAGCTGTCCGATGTGCAGGAGAGAGCAGTATGAGACACGGGTGATTTACGATGGTGCTCGTCTCTATCGGGAAAAGTGTGCTGTCAGAATACAGGCTTTCTGGCGTGGCTACCTTGTTCGCAAATGGTACAGCAACATAAAGAAGTATGTGCCGCCGAAAGATCAACATTTAAGACGAGTATTCTTtgaaaaaaagTTTCAGGAGATGAACGACAGCTTGGTGCAGTCATGCAGCACAGACGTGGAAGCCTTCCTGAATGATATCGATCGCTCCGTGGCCTCGAGCCACGATGTCCTGCACCGCTTCAACGTCAAGTACACGAGTGTTTCTGAAATGGAGGAAAAGGACTGGCTGGAAGCTCAAGAGAAGGCTGTCCAGCGTGGCGTTCAGGACTGCCCCATTTGCCTGAACCGCTTGGGCTCACACAATGGCTCGTCTAAGGAAAACAGGAACGTCCTATTATTGTCCTGCTCCCATCTATTTCATGAGCCCTGTCTGCAGGCCTTTGAGCTTTTCTGCCACGAGGTGAAACCCACATGTCCTCTGTGCCGGTCACACTATGCTAAAATGCTCGTTTCAAATTAGAGATcagtatatttattcaaaatgtcttcatgtttTAGTTTATATAGTGTTTATATAAATCTCCCACATTGCGATTCTACGATAACAAACGGTACGATACAAACTGTCAAAAAGTCACAAACTTTATTGTAAACTGAAGTGAAATACAAAGTAAACTAAAGACAATCCGAACATTTTGcttcacaaacaaatgcaattaaacTCTACAAAACACGAGAGAGAAAACATTCTGAAAATACATTCACACATGTAAAAGAAGCAACAGGCAAAAATGGAAACAGAATTAAGCTTTCCGGAAGATGAGAGTTCAAATGTGACTGACAGACATGTAGCCAGGACACTTTCTAGTAAAGTCAACAGTTCAACAGACTGATAAACTCAAACACCACAGCATCTTTGATGTACTACATTTTTGTAACCCTTGCACCCAATGTTGTACAGATAAGCAGATTATAGAATATGGAATGAATcggcttctttttctttcacagtTATTTCTAGTATATCACTGCAAATGGCTCTATTTTGAGAAATCCAGCACACCAACTCACACACCAGTCCTTGTCCTGCATAACAAGTAACAGCAACATTCCTCATAAAccaattaaattaagaatttagtattatatagttaataataataaaagatgctCTGGCATTACGAAGTTTGTGCAgacaaaagtgacattaaagtttaatacacatacacacacaaagcttaCTCCAATGACACAGTTATTGACATAATACACTTATTATTCCCCAGTTATTTTCttacaaaatgttctttgtgcAAATCAACAGGAAGATATTTTACATGTAACTTCTTTTTAAATCCATGACaataaaaaccacaaaacaatGCATCAAACTGAACCCACTGAGGTGTCAATATTTTTCGATGGCCTTTTCACAGGCTTTGAATTCAGTGTCCCTCATGTAATTCCTAGACCTCTGCGGACGCAAAATTCGATCCGtttcttaaaatgatttcagcCCAAACTTTAGAGTTCGATATCAGTGCCCTGATAGTTTCTTTTGACTTTGGCCAGTTCGAGTTAAAAGATACGGGTGTTGTTTTGGTATGCCGTGTTATTGACAATCACAAGAGGGATTCACAGTGAATTAGTCAATAAAAAGGTACACAAACTAACAATCTGTCTCACTCTTTCACTCATTTGTACGTCTCACACATGCACAACTTGCCTCCTCAATACTGGACAAgaggagacaaaaacaaaaaaaagcctaaaaagCCCGTTTAAGGCATCagaggtgattttttttgtttgtttttgtacaatAATGCTAAATGACTAATCGTCTGGCCTTTTCCACAAATAGCATAGTATGAATGAGGCTCAGAAGCCATTTCATATCTacattctacaaaaataaaaagaagaaatatactgtatatacacgtaaatacatcatttacattattaCGAGGCTTGCCATagttaaagaaatgaaaactgtatttagttttcagtttttttccagaAAGTTCAGTTTTACACGAAACTTTAAGAGAAATGTCAGGAATGGCCAAAACAGATTTGTTCACGTTCTTTTAGCCTACTGGTTTTGGGAATGTTTGAAAACTATACTGAACATATCATACATTAACTGCGTAATCAGTAacatttagggaaaaaaaaaaaacctatgaCACTGTTTCATAGCTGCAAAGAAGACCCTTCAATGATGCGTAATGACAACCGACTCCGCTCGGACTTCACATTCATTTCTCTGCACAACAAGCTTTAACAGATGTGAATCAGACTGATGTGGCTCTGCGGTCCTGTTTCCGCAGCCTTTATATACAAGATCCTACATAATGTAGGAGTTTAGCTTCTGATCTGCGTAGACCAGTATTTTGTTAGACTGAACAGACTGAGCTGGCTTAAAATCCAGCATGAGAGTGTGtggaaaaacatacaaatatctGTTCGTGGATAATCTGCCATTTGCAAAAAGCAAAGCAGCCGCAGAGGTACAGACTAGATGTTTGAAGGCTGTTTTGCTAGTGATGTCGAAATAAGGCAAACGTATAGATCCTTACAAGCTCTGCAGCAATAACCAAGTTCAAAAGATGTATATTACTGGTTATATGCTCTCGGTTTGCGTAGTACATGTAGCATAGTAAAGTATCAAATGTTGTgaaggaagtagcagcagattTAAGTACAGGATCAGGAAGCATATCCCAAGATTGTGCCTCACCTTCTCTCAAATATTTGGTAGCATTTCTCTGCCGTCTTTTCAATTTTGTCGCCTCCCTTATTTAAGACCACAATACACTACGCGCCATTAAACGTGTTAAATCTTGTGGTGAAACACAGCCAGTTCAAGTAAACACAATAACGTATTAAGCTGGTTGTTGGTAGTGACTCGAACCCATAATGTCCATCTCTGAACCTTGCCTACCAATGAAAACAAGAAGAGCAGCTGCAGTGCAAGAAGAAATTTGGCAGGTAGGCTCCCCCGctctttgtaatatttcagtaCTACCCAGTATATGCCAATATTGTGAGTAAGGCACATGTTTGGGGAGTTTCCTTGTCAATTCCCATTACTTAATTCTGTCACATCCAACAAACCTGAATTGTCACAGTAAAGCATGAGGAAACTAAAATCACAATGCTTCCTCATTTATAATTGAtcaacatataaataataattgatctTCATTTTAACAAAGTGAATGTAAACATATGCGATGGCAGACAAAAAGTAACAAGTTTTCAGATTACAAAACTGACTTTTACACGTCAAAATTCAAGCAATAGACATTTAGTATTTGTCATTGTGACTGGCCGCCATGTTTTGcttgtgtattattttctttaactaATTTTGTAATGTGCCCCATTTTCATAAGATCCAGTTGTAATTTGGCATTAAAGCATCTAGAACTTAAGTTaaatttatatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcgcgcagacTAACTGCAATGATTTGACTGCAGTGTTAAATTTGAACGCAATCCTTCAGAAAATATAGTTTCTAATATTAGTACCAATATCATGTGTAATAAAGATGCCTCTCTTGGcattatcaaaaatgtttatatagcatttgtgttatttttatgggaACTAAACCAGTTTCATTTAACAAGGTCCATTTAACTTTACACAATATACTCATCTACAAGGGCGCAAAATGTCATCAAACAATAATTACGGAGGAAAATAATAAGCCCTAATTGAGAATAATGCATGCTTCATTACACATGAAATTATCAGCTTGGCAAACAGCTTAATATTTCCCCTAATCAAACTAGAGAAAAATTAtagataataaaattaataataataataatccctCATTGAAGGGTGCAATCGGGAGG
>XM_043244043.1
aatgacacattttttcattattattcctTTGGTCAagataagaaaaatatgttttttatctATTGCTGAGACTGGAACAGGAAGGTTGTTCTTGGTTGCGGTTGTAATTACAGTGTCCATAAACCTGACGTGATAGTTTCTTCATTTATTGAGACCAATAATTATTCATGAATGCAAACATAACTCATTTTAGACCTCATAGCAAGtgttttaaaaacgtattttaaaagtatttccaCCATTCACTTCATCCCTTCTAATCAGATACATTGACAACCAGTAAAAACTAGTCGAGTTCGTGGGAACGTCACACTGCGTTGAATGGAGCTTCGTTGCGTAGCGACCGAGTAAACAGTGTTTCTGTGGACAGCTATGCCGCGGGGATTCGGCTGTAAAGCAGAGCGCGGGAGGCTGACTCTAGCAGCTGTAGCACTACAGGACCATATCACACGACGCGTTCTCGTTCGAAACATTCCCCGTAACCTCCCCGTATCAGACGCTTCCTGTGGGGCTGCACATGTTAGTAGGAGGCACAGAAATCACAACACAAGGCAGAGCATCATATGCCCTGAGCAGACACAAGGACAAGAGGAGAGAGAGTATGTGCTGGATCATGGCCCTCCACCTCTGACTCTTGCCCAAAGGATGGGTTTGGTGGCAGCTCCTTCAAGAAGACTAACCGCAGAGGAATGGGCAGAGGTCAAAACCAGGTCCATCCAGGAGGGAGACTCAACCCAGCCCTGCGTGATATGCAGAGAGGAGTTTCGCCTGCAACCGCAGGTTCTACTCTCCTGTTCTCATGTATTTCACAAAGTGTGTCTGAAGTCTTTTGAGAAGTTCTCAGGCAGGAAGAGCTGTCCGATGTGCAGGAGAGAGCAGTATGAGACACGGGTGATTTACGATGGTGCTCGTCTCTATCGGGAAAAGTGTGCTGTCAGAATACAGGCTTTCTGGCGTGGCTACCTTGTTCGCAAATGGTACAGCAACATAAAGAAGTATGTGCCGCCGAAAGATCAACATTTAAGACGAGTATTCTTtgaaaaaaagTTTCAGGAGATGAACGACAGCTTGGTGCAGTCATGCAGCACAGACGTGGAAGCCTTCCTGAATGATATCGATCGCTCCGTGGCCTCGAGCCACGATGTCCTGCACCGCTTCAACGTCAAGTACACGAGTGTTTCTGAAATGGAGGAAAAGGACTGGCTGGAAGCTCAAGAGAAGTCGCTCCTCGGTCCTGCCCTTCGCCCGACGTGCCGCCACCTGTCCCAGAGCGCTCGAGCCGCGCTGGTGGCACAGATGTTCCCGATTCAACAGTATCAAACCCTCCGAGAGATGATTGTTTACCTTGCTAATGAATGAGTGGAAATAATCCACCGTGTTTACTAAAAAACACAAGCTGCGCAGATAATGCATGCCTAGCCTTTCATTACATGCGAGCTGAAGACAAGATTTGGCATTTCAGCAGGCCTCATTGTTATTGTGTTGAGGCAGCCAATGGCAGTGATccactaaaaaaaaaggaaacactcATTTTTTATCTTCTGGATAAGAGGTCGGGCAGATAACTCGAGACTCTAAAAACCTAGAGTTAGCAGAGTTCAAGTCAGAACCAACCCGTTCCCACCCAGACAAACAGAACGAACAATTATGAAATGTTCTCGTGCGGAGCGATtggcctttgctgaataaaggaAGCTTGACAGCAGTTAATGATTATGGCTGCACACCTACCTTCTGTTAGACTCAACTGAACTATAACTGTGATACGAGCTGCACACGGCGGTCATAAATCTGCTAATCATTTTTGCCTGATAATGGAGCAGGAAAACACTCTCACGAAACACGAGGTGTGCGTCTGTTCACaagcatgttgttttttcatttcacagGAGCATTCTCAGGCCGGGAAAGCAAATGCTAGTTAATTAAATCAAAGGAAATAATAGAAGAATTTAGCTTGTTagattaaatatgaatgaattagCATTCCACCGTATTAAGTTTGAAATAACTGagaatgttttatgttgttgtagGAAGTCTTTGCtgcatttgatatatttagaatttatttgcattatttaacattttcataatctCCATCCataactgcagttgggttattttgattatgtttaacaataactaaaaaggacaaaaacagcaaataagcactatgaaaacattataaaaaaaactgtcatggAAAAGGTATTACTCTAGGCTTTAGCCTTTTTCTTGAGAAattattctaacatgctgattggTTCTAGTATgcgttttggtttttttaaagagaaaattttattaatttgtttcgAAAGGATACATtgaaaattgatcaaaagtaaagaCATGCATACTGTTACAAATGCTGTTCTCTTgcactttctatttatcaaagaaccAGCCtttccaacattgataataagaatcATAAACAATTGAGAATGAACTAATAATGGTGCAGCAGCGATCTAGCACAGTCAGTTACGTTCAAATCTCAAACAACAGAATTAATGGTGATAATCATTTAGAATTGTAaggaatgaaaaatgtaaatggtcGTCTAATCAACAAATACAGAGCAGCAGTTTTAATGAGTGGCACTTACCAGCATTAATCACTGTGCATTTTGAATGGTTTTAGTCTCTTAAAAGTCAAGAATTTTCCCCCAACAGCACATTTTACGGATAGTGCCTAATTAACGTTTGATCGTAACAGGTTATGGGTAAAACTTTCAAATGGATACTGTACGATATATATTATGTAGTTGACATTTTAGTATCATTGAAAGGAACTGGGCGGGCGTAGGTGCATATTATGCATTGTGTAATTCTCACTAGTGATATTATGTTTACTGCTGCCAATCTCTAGTacagaaatgacttttttttaagttacacAATCACAAACCATTGTTTTTCTTGCTTCCACCAGGCTGTCCAGCGTGGCGTTCAGGACTGCCCCATTTGCCTGAACCGCTTGGGCTCACACAATGGCTCGTCTAAGGAAAACAGGAACGTCCTATTATTGTCCTGCTCCCATCTATTTCATGAGCCCTGTCTGCAGGC

Function

symbol description
rnf32 Predicted to enable metal ion binding activity. Orthologous to human RNF32 (ring finger protein 32).

NR:

description
PREDICTED: RING finger protein 32 isoform X2

GO:

id name namespace
GO:0008270 zinc ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043244041.1 True 4824 mRNA 0.39 8 23084954 23096104
XM_043244043.1 False 3074 mRNA 0.42 8 23088424 23096105

Neighbor

gene id symbol gene type direction distance location
ube3c ube3c,LOC107684811,LOC107556065,LOC107653289,LOC107724408,LOC107591004,LOC107742134 coding downstream 42453 23018379 ~ 23042501 (-)
dnajb6b dnajb6b,LOC107684822,LOC107653290,LOC107556066,LOC107724407,LOC107742135,LOC107591005 coding downstream 71511 22993209 ~ 23013443 (-)
dync2i1 LOC107556069,LOC107739348,LOC107591041,LOC107683362 coding downstream 293233 22779958 ~ 22791721 (-)
shrprbck1r shrprbck1r,LOC107722400,LOC107656201,LOC107590993,LOC107739381,LOC107556071,LOC107653293 coding downstream 326423 22747024 ~ 22758531 (-)
grpel1 grpel1,LOC107722418,LOC107590998,LOC107656173,LOC107739410,LOC107556074 coding downstream 472956 22608958 ~ 22611998 (-)
rbm33a rbm33,LOC107724401,LOC107684887 coding upstream 52841 23148946 ~ 23183718 (-)
en2a LOC107742144,LOC107659441,LOC107724415,LOC107598710,LOC107684735 coding upstream 111490 23207595 ~ 23210525 (-)
insig1 insig1,LOC107724405,LOC107591013,LOC107684749,LOC107659442,LOC107598709 coding upstream 125883 23221988 ~ 23227599 (-)
htr5ab htr5ab,htr5a,LOC107684958,LOC107591053,LOC107659435,LOC107742155,LOC107598724,LOC108412811,LOC103024346 coding upstream 202014 23298119 ~ 23308773 (-)
LOC122347951 ambra1b,LOC107673272,LOC107720791,LOC107740878,LOC107569709,LOC107670191,LOC107722385,LOC107656180 coding upstream 279855 23375960 ~ 23406624 (-)
G55470 NA non-coding downstream 21997 23059458 ~ 23062957 (-)
G55409 NA non-coding downstream 291703 22793033 ~ 22793251 (-)
G55357 NA non-coding downstream 490124 22594620 ~ 22594830 (-)
G55353 NA non-coding downstream 490413 22588277 ~ 22594541 (-)
G55331 NA non-coding downstream 512175 22546955 ~ 22572779 (-)
G55524 NA non-coding upstream 131954 23228059 ~ 23228734 (-)
G55697 LOC107684714,LOC107724393,LOC107598708,LOC107742128,LOC107659444 non-coding upstream 247358 23343463 ~ 23772937 (-)
G55710 NA non-coding upstream 311023 23407128 ~ 23408712 (-)
G55698 puf60a,puf60,LOC107591014,LOC106568618,LOC102778806 non-coding upstream 670314 23766419 ~ 23770102 (-)
G55783 LOC107591029,LOC107690726,LOC107757776,LOC107723139,LOC107701239,LOC107598690 non-coding upstream 955779 24051884 ~ 24115931 (-)
nom1 nom1,LOC107724412,LOC107684778,LOC107653288,LOC107742133 other downstream 26173 23051190 ~ 23058781 (-)
wdr97 LOC107722359,LOC107591040,LOC107684931 other downstream 305628 22769632 ~ 22779326 (-)
otog LOC107722353,LOC107656169,LOC107591037,LOC107703275,LOC107742581,LOC107554595 other downstream 596031 22443798 ~ 22488923 (-)
LOC122347949 LOC107560124,LOC107722378,LOC107656186,LOC107554594,LOC107742573 other downstream 644515 22432400 ~ 22440439 (-)
si:dkey-23n7.10 si:dkey-23n7.10,LOC107560112,LOC107742582,LOC107554633,LOC107722376,LOC107703276 other downstream 979625 22102914 ~ 22105329 (-)
G55732 htr5ab,LOC107684958,LOC107591053,LOC107742155,LOC107659435,LOC107598724 other upstream 639934 23736039 ~ 23741133 (-)
rrad rrad,LOC107728691,LOC107564552,LOC107725029 other upstream 2325510 25421615 ~ 25423593 (-)
ciao2b fam96b,LOC107681502,LOC107673764 other upstream 2329539 25425644 ~ 25428025 (-)
si:ch211-260e23.7 si:ch211-260e23.7,LOC107736736,LOC107562536,LOC107698628 other upstream 2758675 25854780 ~ 25857238 (-)
hsd17b12b hsd17b12b,dh12b,LOC107701268,LOC107757588,LOC107600455,LOC107695363,LOC107730274 other upstream 4685553 27781658 ~ 27825021 (-)

Expression


Co-expression Network