G55065


Basic Information

Item Value
gene id G55065
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056705.1
NCBI id CM032074.1
chromosome length 41700998
location 21788750 ~ 21789393 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU81588
tgCACTATGGCTGTACATTTTCTAGCACTGTTAAGATGACTTGACTGTTTGTCAAGACAAATTCGTTGTGTAAACACATTCGTCTTTTCTGATTCAGATATCACACAATTAACATCTGGGTGAGGTCACACATATTATACGGTGGGGAATAAATTTATTAATCTGGAATATTTTATCTGCTTCACTTACGGCACctaagattataataataagtgttgttttcgttttttatgaatttattattaaaagatatCTGCAATCATAGGACATTTGCCATTAGGTACACAtaaatgcgcacacacacacacgcacacgcacacacaaatctTCACTCTCTGTTCTTTAGACACATTCTATCTCTTGTTCCTGATGTTTTTTAAACCTCTGCAGCAGTTCACTATTAGACACAACTCTATTTTCATCTTCACTGTTGGAGTCTGTGTCTTCTGAGCTGCTATTAGACTCCTCTACCCTCTTCTTCTGTTTACCTTTATGCTTATGtttcttgttcttt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU81588 True 514 lncRNA 0.36 2 21788750 21789393

Neighbor

gene id symbol gene type direction distance location
abcc12 abcc12,LOC107696716,LOC107551482,LOC107722347 coding downstream 15530 21759330 ~ 21773220 (-)
heatr3 heatr3,LOC107722414,LOC107696712,LOC107758777,LOC107657125 coding downstream 146155 21632687 ~ 21642595 (-)
tent4b papd5,LOC107696711,LOC107657124,LOC107750234 coding downstream 157070 21614693 ~ 21631680 (-)
adcy7 LOC107551487,LOC107696709,LOC107750233,LOC107554606 coding downstream 174090 21575607 ~ 21614660 (-)
nkd1 nkd1,LOC107696708,LOC107750231,LOC107742769,LOC107657122 coding downstream 265123 21498925 ~ 21523627 (-)
slc7a10a slc7a10a,LOC107722389,LOC107696718,LOC107551479,LOC107554615,LOC107741033,LOC108432406,LOC108259476 coding upstream 17235 21806628 ~ 21822977 (-)
zgc:165481 zgc:165481,LOC107657136,LOC107696720,LOC107551474,LOC107722371,LOC107554618,LOC107741037 coding upstream 103563 21892956 ~ 21905900 (-)
celf1 celf1,LOC107722368,LOC107560100,LOC107657138,LOC107554620 coding upstream 149822 21939215 ~ 21966095 (-)
c1qtnf4 c1qtnf4,LOC107677357,LOC107554622,LOC107560103,LOC107657097,LOC107758455 coding upstream 183982 21973375 ~ 21981553 (-)
LOC122349698 LOC107677275,LOC107722403,LOC107560104,LOC107677263 coding upstream 200753 21990146 ~ 21992258 (-)
G54978 NA non-coding downstream 290769 21497615 ~ 21497981 (-)
G54977 NA non-coding downstream 291250 21497213 ~ 21497500 (-)
G54976 NA non-coding downstream 291703 21496691 ~ 21497047 (-)
G54971 NA non-coding downstream 331780 21456714 ~ 21456970 (-)
G54970 NA non-coding downstream 332883 21455565 ~ 21455867 (-)
G55189 NA non-coding upstream 293083 22082476 ~ 22082840 (-)
G55190 NA non-coding upstream 293571 22082964 ~ 22083293 (-)
G55194 NA non-coding upstream 297241 22086634 ~ 22087088 (-)
G55191 LOC107703282,LOC107742559,LOC107677184,LOC107554629,LOC107560109 non-coding upstream 297953 22087346 ~ 22088752 (-)
G55193 NA non-coding upstream 300069 22089462 ~ 22090498 (-)
cebpa cebpa,LOC107722391,LOC107696713,LOC107551484,LOC107733057,LOC107657126,LOC107580367 other downstream 35312 21653321 ~ 21753438 (-)
G54872 LOC107713054,LOC107550285,LOC107657115 other downstream 720375 21064933 ~ 21068375 (-)
G54687 NA other downstream 1507944 20278852 ~ 20280806 (-)
G54637 rfx7,LOC107689974,LOC107740453,LOC107563480,LOC107664392,LOC107755110,LOC107553094 other downstream 1787104 19995062 ~ 20001646 (-)
tex9 tex9 other downstream 1811469 19973261 ~ 19977281 (-)
G55165 cd59,LOC107560108,LOC107736732,LOC107677235,LOC107722399,LOC107554602 other upstream 263403 22052796 ~ 22056245 (-)
si:dkey-23n7.10 si:dkey-23n7.10,LOC107560112,LOC107742582,LOC107554633,LOC107722376,LOC107703276 other upstream 313521 22102914 ~ 22105329 (-)
LOC122347949 LOC107560124,LOC107722378,LOC107656186,LOC107554594,LOC107742573 other upstream 643007 22432400 ~ 22440439 (-)
otog LOC107722353,LOC107656169,LOC107591037,LOC107703275,LOC107742581,LOC107554595 other upstream 654405 22443798 ~ 22488923 (-)
wdr97 LOC107722359,LOC107591040,LOC107684931 other upstream 980239 22769632 ~ 22779326 (-)

Expression


Co-expression Network