RNA id: XM_043245434.1


Basic Information

Item Value
RNA id XM_043245434.1
length 2778
RNA type mRNA
GC content 0.46
exon number 30
gene id map4k2
representative False

Chromosome Information

Item Value
chromosome id NC_056705.1
NCBI id CM032074.1
chromosome length 41700998
location 12085958 ~ 12101230 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

TTTCAGGCTAGAAACATTAGGAGCTCAGAAATGGCTGCTATCAAAATTGTTAAACTGGATCCAGGTGATGACATCACCTCCATCCAGCAGGAGATAACAATGATGAAGGAGTGTAAGCATAAGAACATTGTGGCCTATTATGGCACTTACCACAGTAACTGGACCTTTAAAGGAAAAACAGATTGCTTACATCTGCAGGGAAACACTCCAGGGTTTGAATCATCTCCACGAGACAGGCAAAATACACAGAGACATTAAGGGGGCCAATATTCTTCTTACTGATCGAGGAGATGTCAAGCTGGCTGATTTTGGGGTTGCGGCTGAGATCAGTGCTTCTGTTGCCAAGAGGAAGTCCTTCATAGGAACTCCTTACTGGATGGCCCCTGAGGTGGCTGCGGTGGAAAAGAAGGGTGGATATAACCATCTGTGTGATATCTGGGCAGTGGGCATCACTTCCATTGAGCTGGCAGAGCTACAGCCACCTATGTTTGACCTTCATCCCATGCGAGCTCTGATGTTGATGTCTAAGAGCAGCTTTCAGCCTCCCAAACTAAAAGACAAGAGCAAATGGTCTGCAGGGTTTCATAGCTTTGTGAAGATGTGTTTGATCAAAAGTCCTCGCAAGAGGCCAACAGCAGAAACTGTTCTCCAGCACCCTTTCGTAACACAGTTACTCACCAGAAAATTGATGATTGAGCTACTGGACATGGCAAGTAACCCAGACCTCCATCATCCACCCAGTTTTGAGGAGAATGAAGAGgcGAACGATACAGCCCCAGATACAATCCAGTCTAAAGGGAAACATATGCCAGTGGAGAGAAGTTTATCTGAAGAACAATttgacCAGGTCAAGTTTACCCCTCCCAGGAGAAAAGAGACTGAACCCTATCCTGATCTGGGATCGTGTGATGATTGGAGCATATCTGGAGACGAACCAGAGTCACCGGGTCTTTTGGAAAGCGTGGAGGAAGAGTTACAGCAGAGGAGTTTGACAGTAGAAAGACTCTCATATTTTGAGTGGAGTAAAAGGAAAAGTGGACTGTTCAGCCCACCACCCATCTCTGCTACGACATCACTTCCTCCCATGAGCTCCTTAGACTCTGATCTGGAGGACAAGAACCTCACTCTTCGGCCCAGTGCTACTCTTTGCCCTGAAGCTGTATTAAATCCTAAATCAGTGTTGTCGAGGTGCTCAGGCAGTCAGGATGTGCGGCACTGGTGCAGTAATGACACACAGGACAAACAGAGGACTCTTACAAGGACTCTCAGCAGAGACACGGCTCTCTCTCCGGAGTGGAGCACcatgagaaagaaaacagaggaCTCTAGAGCCGATTCTCACGGACTTCCTCCCACTCCCCAAGTCTATATGGGGGCCTGTTTTAGTAAAGTATTTAATGGATGCCCACTGACCATTCACTGTGCAGAAACGTGGGTTTTGCCTAAAACAAGAGATCAGTATTTAATTCTGGGTGCGGAGGAGGGTGTTTATATTCTTAACTTAAATGAACTGCATGAAGACACCTTAGAAAAGTTGCTTCCACAGAGATGCACTTGGCTTTACGTCATGAACAATGTCTTAATGTCCATCTCTGGTAAGTCGTCTCATCTCTGCTCTCATAGACTGACAGCTCTGTTTGAGCAGCGAGGGCACTTGCAGAGGAAACAGGGTCACTTGTCTCTCGGCACCAACCGCTTCACAGAACGGATCATACACAGGAAGTTTGCCGTGTCAGTGAAAATCGCAGACACCAAGGGATGTCGGAAGTGCAGCGTGGCTCGTAACCCATACACAGACAGCACGTTTTTATGTGCTGCGGTTCCCTCTGGTCTTGTGCTACTATTGTGGTATGAACCACTCCAGAAGTTCATGCACCTCAAGCACATTGCAGTGCCCCTACCGGACCCGTTGCCCATCTTTGAGCTGCTGGTGTTAATGACAGATGAGCTTCCTCAGCTCTGTGTGGGCGTCCAGGAAAGCCTCCAACAGCAAAACGAACAACAGCTAAAGTTTGACATCATCCATCTGAACGGCACGCCAAACCCTCAGCCAGacAGTGAGACAGTAAGAGCTGTACAAGTGACACAGCTGGACAGAGACACGGTTTTAATTGCACTGGAAAAAACGGTGAAGATTGTCAATATGCAGGGTGTCCCGAGCAAGGAGTTAGCATCCAAACTGGAGTTTGACTTCGCTATCGAGACTTTAGTTTGTTTAGAAGAAAGTGTTTTAGCTTTCTGGAAACATGGGCTTAAAGGACTGAGTCTGCACAACTGTGAGGTAACACAGGAAATCACAGACGAAAGCCGAGTGTTCAAGGTTTTAGGCACGCACAGAGACATTGTTTTGCAGAGCACCCCAACTGAAAACCCTTCAGCCACTagcaatttatacattttaacgGGTCACGAGAGCAGCTACTGAGGAAAGCCAGCGGATGTAACCTGTAAATAACATGCATGACGACAAGATTGGCGTTTAAGAGACAGAATGCATGAAAACAGATAATACAGATAGCTTCAGAGCTGCACGTCTAGTGAACGCAGTCCTTCAGTCGACATCACTGGTACACGATTGTGAGGGTACAAAAAAGAAAGCCCAAACCCttgcttctttttgtttgtccctctaaagatgttttttttgtcattgttgtcAATAAACTCTCATATGAAATAATATGGTTTAAAcaaacgtatttaaaaaaaaaaatcatgtgataTTTTGTGATGGAAGGATTGTGATAACTACTAATAAACTGATGCAGTGAAAGCAAA

Function

GO:

id name namespace
GO:0006950 response to stress biological_process
GO:0006468 protein phosphorylation biological_process
GO:0005737 cytoplasm cellular_component
GO:0005524 ATP binding molecular_function
GO:0004702 obsolete signal transducer, downstream of receptor, with serine/threonine kinase activity molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU77264 lncRNA downstream 62627 11998207 ~ 12023331 (-) True G52166
TU77258 lncRNA downstream 66916 11986052 ~ 12019042 (-) True G52163
TU77195 lncRNA downstream 177296 11906970 ~ 11908662 (-) True G52120
TU77180 lncRNA downstream 213747 11865917 ~ 11872211 (-) True G52107
TU77161 lncRNA downstream 285466 11793143 ~ 11800492 (-) False LOC122348489
TU77373 lncRNA upstream 25057 12122880 ~ 12128633 (-) False zfta
TU77407 lncRNA upstream 37108 12134931 ~ 12141335 (-) True G52246
TU77402 lncRNA upstream 45492 12143315 ~ 12144042 (-) True G52245
XR_006251309.1 lncRNA upstream 81718 12179541 ~ 12181562 (-) False LOC122348338
TU77392 lncRNA upstream 82295 12180118 ~ 12184955 (-) True LOC122348338
XM_043243594.1 mRNA downstream 14305 12069584 ~ 12071653 (-) True LOC122348280
XM_043245955.1 mRNA downstream 37462 12045335 ~ 12048496 (-) True LOC122349790
XM_043245954.1 mRNA downstream 40714 12041680 ~ 12045244 (-) True LOC122349789
XM_043245956.1 mRNA downstream 44418 12038918 ~ 12041540 (-) True LOC122349791
XM_043244065.1 mRNA downstream 50573 12033349 ~ 12035385 (-) True LOC122348523
XM_043245798.1 mRNA upstream 3948 12101771 ~ 12107619 (-) True men1
XM_043243694.1 mRNA upstream 29530 12127353 ~ 12135939 (-) True zfta
XM_043243698.1 mRNA upstream 46617 12144440 ~ 12158250 (-) True ecsit
XM_043243700.1 mRNA upstream 46617 12144440 ~ 12147499 (-) False ecsit
XM_043243699.1 mRNA upstream 46617 12144440 ~ 12147498 (-) False ecsit
TU77279 other downstream 57259 12028050 ~ 12028699 (-) True G52172
unassigned_transcript_1282 other downstream 154571 11929463 ~ 11931387 (-) True LOC122347839
XR_006251333.1 other downstream 285061 11793695 ~ 11800897 (-) False LOC122348489
TU77005 other downstream 831709 11252230 ~ 11254249 (-) True G51969
unassigned_transcript_1279 other downstream 1226583 10859303 ~ 10859375 (-) True trnar-ucg_116
TU77538 other upstream 266498 12364321 ~ 12373708 (-) False sstr1b
unassigned_transcript_1283 other upstream 344857 12442680 ~ 12442751 (-) True trnaa-cgc_56
TU77682 other upstream 536057 12633880 ~ 12638870 (-) True fcer1g
unassigned_transcript_1284 other upstream 585335 12683158 ~ 12683231 (-) True trnar-ucu_9
TU77750 other upstream 672509 12770332 ~ 12772437 (-) True G52473

Expression Profile