Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU115503 |
| length | 234 |
| lncRNA type | inter_gene |
| GC content | 0.36 |
| exon number | 1 |
| gene id | G85776 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035905.1 |
| NCBI id | CM008308.1 |
| chromosome length | 42966623 |
| location | 34696285 ~ 34696518 (-) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU115422 | lncRNA | downstream | 60179 | 34624577 ~ 34636106 (-) | True | G85722 |
| TU115419 | lncRNA | downstream | 120071 | 34575871 ~ 34576214 (-) | True | G85719 |
| TU115415 | lncRNA | downstream | 146261 | 34549603 ~ 34550024 (-) | True | G85715 |
| TU115381 | lncRNA | downstream | 364938 | 34267456 ~ 34331347 (-) | True | G85687 |
| TU115393 | lncRNA | downstream | 376731 | 34274391 ~ 34319554 (-) | False | daam2 |
| TU115514 | lncRNA | upstream | 30027 | 34726545 ~ 34729144 (-) | True | G85782 |
| TU115513 | lncRNA | upstream | 36021 | 34732539 ~ 34735575 (-) | True | G85781 |
| TU115505 | lncRNA | upstream | 70309 | 34766827 ~ 34767684 (-) | False | G85777 |
| TU115508 | lncRNA | upstream | 70309 | 34766827 ~ 34767684 (-) | True | G85777 |
| TU115633 | lncRNA | upstream | 504962 | 35201480 ~ 35300903 (-) | True | G85884 |
| XM_022673201.1 | mRNA | downstream | 224680 | 34274516 ~ 34471605 (-) | False | daam2 |
| XM_022673199.1 | mRNA | downstream | 224680 | 34274516 ~ 34471605 (-) | False | daam2 |
| XM_022673200.1 | mRNA | downstream | 283175 | 34274516 ~ 34413110 (-) | True | daam2 |
| XM_022673195.1 | mRNA | downstream | 683728 | 33955195 ~ 34012557 (-) | True | rbks |
| XM_022673196.1 | mRNA | downstream | 687634 | 33955195 ~ 34008651 (-) | False | rbks |
| XM_007248454.3 | mRNA | upstream | 102621 | 34799139 ~ 34867074 (-) | False | zdhhc14 |
| XM_007248453.3 | mRNA | upstream | 102621 | 34799139 ~ 34867074 (-) | True | zdhhc14 |
| XM_022673204.1 | mRNA | upstream | 173627 | 34870145 ~ 35195330 (-) | True | LOC103041141 |
| XM_022673205.1 | mRNA | upstream | 173627 | 34870145 ~ 35180211 (-) | False | LOC103041141 |
| XM_022673208.1 | mRNA | upstream | 624951 | 35321469 ~ 35337462 (-) | True | cldn20 |
| XR_002650389.1 | other | downstream | 683723 | 33955389 ~ 34012562 (-) | False | rbks |
| XR_002650288.1 | other | downstream | 757584 | 33938460 ~ 33938701 (-) | True | LOC111193148 |
| TU115290 | other | downstream | 856656 | 33834012 ~ 33839629 (-) | True | G85618 |
| TU115204 | other | downstream | 1177614 | 33509680 ~ 33518671 (-) | True | G85550 |
| TU115139 | other | downstream | 1584551 | 33111474 ~ 33111734 (-) | True | G85501 |
| TU115663 | other | upstream | 591714 | 35288232 ~ 35295034 (-) | True | G85902 |
| XR_001518670.2 | other | upstream | 1895115 | 36591633 ~ 37101581 (-) | False | nrxn3 |
| XR_002650394.1 | other | upstream | 1895115 | 36591633 ~ 37087931 (-) | False | nrxn3 |
| TU116404 | other | upstream | 3286356 | 37982874 ~ 38069052 (-) | True | G86432 |
| TU117171 | other | upstream | 5836850 | 40533368 ~ 40536334 (-) | True | LOC111193261 |
