Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU115678 |
| length | 628 |
| lncRNA type | intronic |
| GC content | 0.38 |
| exon number | 2 |
| gene id | G85915 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035905.1 |
| NCBI id | CM008308.1 |
| chromosome length | 42966623 |
| location | 35375049 ~ 35380580 (-) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU115667 | lncRNA | downstream | 43370 | 35331081 ~ 35331679 (-) | True | G85906 |
| TU115633 | lncRNA | downstream | 74146 | 35201480 ~ 35300903 (-) | True | G85884 |
| TU115505 | lncRNA | downstream | 607365 | 34766827 ~ 34767684 (-) | False | G85777 |
| TU115508 | lncRNA | downstream | 607365 | 34766827 ~ 34767684 (-) | True | G85777 |
| TU115513 | lncRNA | downstream | 639474 | 34732539 ~ 34735575 (-) | True | G85781 |
| TU115685 | lncRNA | upstream | 163372 | 35543952 ~ 35544426 (-) | True | G85922 |
| TU115689 | lncRNA | upstream | 174280 | 35554860 ~ 35555189 (-) | True | G85926 |
| TU115691 | lncRNA | upstream | 196356 | 35576936 ~ 35579100 (-) | True | G85927 |
| TU115731 | lncRNA | upstream | 223798 | 35604378 ~ 35605763 (-) | True | G85955 |
| TU115751 | lncRNA | upstream | 287183 | 35667763 ~ 35672891 (-) | True | G85970 |
| XM_022673208.1 | mRNA | downstream | 37587 | 35321469 ~ 35337462 (-) | True | cldn20 |
| XM_007248455.3 | mRNA | downstream | 47755 | 35321469 ~ 35327294 (-) | False | cldn20 |
| XM_022673204.1 | mRNA | downstream | 179719 | 34870145 ~ 35195330 (-) | True | LOC103041141 |
| XM_022673205.1 | mRNA | downstream | 194838 | 34870145 ~ 35180211 (-) | False | LOC103041141 |
| XM_007248454.3 | mRNA | downstream | 507975 | 34799139 ~ 34867074 (-) | False | zdhhc14 |
| XM_022673213.1 | mRNA | upstream | 176628 | 35557208 ~ 35600287 (-) | True | scaf8 |
| XM_022673215.1 | mRNA | upstream | 226506 | 35607086 ~ 35632755 (-) | False | LOC103042065 |
| XM_022673217.1 | mRNA | upstream | 226506 | 35607086 ~ 35632755 (-) | False | LOC103042065 |
| XM_022673216.1 | mRNA | upstream | 226506 | 35607086 ~ 35632755 (-) | False | LOC103042065 |
| XM_022673214.1 | mRNA | upstream | 226506 | 35607086 ~ 35632755 (-) | True | LOC103042065 |
| TU115663 | other | downstream | 80015 | 35288232 ~ 35295034 (-) | True | G85902 |
| XR_002650389.1 | other | downstream | 1362487 | 33955389 ~ 34012562 (-) | False | rbks |
| XR_002650288.1 | other | downstream | 1436348 | 33938460 ~ 33938701 (-) | True | LOC111193148 |
| TU115290 | other | downstream | 1535420 | 33834012 ~ 33839629 (-) | True | G85618 |
| TU115204 | other | downstream | 1856378 | 33509680 ~ 33518671 (-) | True | G85550 |
| XR_001518670.2 | other | upstream | 1211053 | 36591633 ~ 37101581 (-) | False | nrxn3 |
| XR_002650394.1 | other | upstream | 1211053 | 36591633 ~ 37087931 (-) | False | nrxn3 |
| TU116404 | other | upstream | 2602294 | 37982874 ~ 38069052 (-) | True | G86432 |
| TU117171 | other | upstream | 5152788 | 40533368 ~ 40536334 (-) | True | LOC111193261 |
| TU117264 | other | upstream | 5383512 | 40764092 ~ 40770471 (-) | False | LOC103044865 |
