Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU4808 |
| length | 1168 |
| lncRNA type | sense_over |
| GC content | 0.53 |
| exon number | 3 |
| gene id | slc6a4 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_035897.1 |
| NCBI id | CM008300.1 |
| chromosome length | 26953843 |
| location | 14380755 ~ 14471752 (-) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_001518350.2 | lncRNA | downstream | 9671 | 14369252 ~ 14371084 (-) | False | LOC107197060 |
| TU4825 | lncRNA | downstream | 9696 | 14369213 ~ 14371059 (-) | True | LOC107197060 |
| TU4824 | lncRNA | downstream | 9727 | 14369213 ~ 14371028 (-) | False | LOC107197060 |
| TU4821 | lncRNA | downstream | 17683 | 14362000 ~ 14363072 (-) | True | G3621 |
| XR_002649055.1 | lncRNA | downstream | 61858 | 14281032 ~ 14318897 (-) | True | LOC111190296 |
| XR_002649220.1 | lncRNA | upstream | 29663 | 14437671 ~ 14513806 (-) | True | LOC111190767 |
| XR_002649204.1 | lncRNA | upstream | 29665 | 14437673 ~ 14513968 (-) | False | LOC111190767 |
| XR_002649210.1 | lncRNA | upstream | 29667 | 14437675 ~ 14513962 (-) | False | LOC111190767 |
| TU4835 | lncRNA | upstream | 29672 | 14437680 ~ 14513931 (-) | False | LOC111190767 |
| TU4840 | lncRNA | upstream | 66077 | 14474085 ~ 14475176 (-) | True | G3631 |
| XM_007236816.3 | mRNA | downstream | 16286 | 14331805 ~ 14364469 (-) | False | LOC103037230 |
| XM_007236815.3 | mRNA | downstream | 32061 | 14331805 ~ 14348694 (-) | True | LOC103037230 |
| XM_022664148.1 | mRNA | downstream | 32062 | 14331805 ~ 14348693 (-) | False | LOC103037230 |
| XM_007236813.3 | mRNA | downstream | 101465 | 14255315 ~ 14279290 (-) | False | git1 |
| XM_007236812.3 | mRNA | downstream | 101465 | 14255315 ~ 14279290 (-) | True | git1 |
| XM_007236822.3 | mRNA | upstream | 6246 | 14414254 ~ 14435382 (-) | True | blmh |
| XM_007236825.3 | mRNA | upstream | 109927 | 14517935 ~ 14520858 (-) | True | LOC103039849 |
| XM_007236826.3 | mRNA | upstream | 132399 | 14540407 ~ 14577509 (-) | True | LOC103040167 |
| XM_007236828.2 | mRNA | upstream | 185017 | 14593025 ~ 14630713 (-) | False | LOC103040481 |
| XM_007236827.2 | mRNA | upstream | 185017 | 14593025 ~ 14630713 (-) | True | LOC103040481 |
| TU4805 | other | downstream | 96530 | 14283623 ~ 14284225 (-) | True | G3612 |
| XR_002648804.1 | other | downstream | 248219 | 14124782 ~ 14132536 (-) | False | LOC111189390 |
| trnae-uuc | other | upstream | 627007 | 15035015 ~ 15035086 (-) | True | trnae-uuc |
| TU5685 | other | upstream | 1869999 | 16278007 ~ 16282630 (-) | False | LOC103022652 |
| XR_002649862.1 | other | upstream | 2236544 | 16644552 ~ 16653968 (-) | False | ercc2 |
| TU6059 | other | upstream | 3575877 | 17983885 ~ 17998736 (-) | True | LOC103040336 |
| TU6226 | other | upstream | 3622354 | 18030362 ~ 18040766 (-) | True | G4621 |
