RNA id: trnae-uuc



Basic Information


Item Value
RNA id trnae-uuc
length 72
RNA type tRNA
GC content 0.53
exon number 1
gene id trnae-uuc
representative True

Chromosome Information


Item Value
chromosome id NC_035897.1
NCBI id CM008300.1
chromosome length 26953843
location 15035015 ~ 15035086 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence


TCCCATATGGTCTAACGCGTAGGATTTCTGGCTTTCATCCAGACGGTCCGGGTTCGAATCCCGGTATGGGAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
XR_002649509.1 lncRNA downstream 266 15033171 ~ 15034749 (-) True LOC111191520
TU5074 lncRNA downstream 16815 15016304 ~ 15018200 (-) True G3785
TU5032 lncRNA downstream 52502 14953038 ~ 14982513 (-) False G3756
TU5063 lncRNA downstream 74076 14960516 ~ 14960939 (-) True G3775
TU5040 lncRNA downstream 79666 14900548 ~ 14955349 (-) False G3756
TU5327 lncRNA upstream 34444 15069530 ~ 15069797 (-) True G3947
TU5353 lncRNA upstream 147316 15182402 ~ 15186394 (-) True G3968
TU5373 lncRNA upstream 192975 15228061 ~ 15228651 (-) True G3984
TU5393 lncRNA upstream 552220 15587306 ~ 15629722 (-) False LOC107197064
XR_002649767.1 lncRNA upstream 552756 15587842 ~ 15629712 (-) False LOC107197064
XM_007236847.2 mRNA downstream 150951 14880698 ~ 14884064 (-) True LOC103045693
XM_022666007.1 mRNA downstream 197769 14822526 ~ 14837246 (-) True LOC103043873
XM_022671130.1 mRNA downstream 279237 14753910 ~ 14755778 (-) True LOC111192841
XM_007236833.3 mRNA downstream 314621 14712318 ~ 14720394 (-) True LOC103041915
XM_007236828.2 mRNA downstream 404302 14593025 ~ 14630713 (-) False LOC103040481
XM_007236861.3 mRNA upstream 80539 15115625 ~ 15120654 (-) True LOC103023234
XM_007236860.3 mRNA upstream 91662 15126748 ~ 15131139 (-) True evi2b
XM_007236865.2 mRNA upstream 636005 15671091 ~ 15694631 (-) True LOC103024177
XM_007236870.3 mRNA upstream 664918 15700004 ~ 15705950 (-) False usf1
XM_007236868.3 mRNA upstream 664918 15700004 ~ 15705949 (-) False usf1
TU4805 other downstream 750790 14283623 ~ 14284225 (-) True G3612
XR_002648804.1 other downstream 902479 14124782 ~ 14132536 (-) False LOC111189390
XR_002648814.1 other downstream 902479 14125128 ~ 14132536 (-) False LOC111189390
XR_002648788.1 other downstream 902479 14127369 ~ 14132536 (-) False LOC111189390
XR_002648822.1 other downstream 902479 14127437 ~ 14132536 (-) False LOC111189390
TU5685 other upstream 1242921 16278007 ~ 16282630 (-) False LOC103022652
XR_002649862.1 other upstream 1609466 16644552 ~ 16653968 (-) False ercc2
TU6059 other upstream 2948799 17983885 ~ 17998736 (-) True LOC103040336
TU6226 other upstream 2995276 18030362 ~ 18040766 (-) True G4621
trnap-agg other upstream 3366476 18401562 ~ 18401633 (-) True trnap-agg