Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_022674038.1 |
| length | 718 |
| RNA type | mRNA |
| GC content | 0.57 |
| exon number | 8 |
| gene id | LOC111193387 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035907.1 |
| NCBI id | CM008310.1 |
| chromosome length | 11650534 |
| location | 4960238 ~ 4963416 (-) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_002650498.1 | lncRNA | downstream | 78 | 4958165 ~ 4960160 (-) | False | LOC111193397 |
| XR_002650497.1 | lncRNA | downstream | 581 | 4958165 ~ 4959657 (-) | True | LOC111193397 |
| TU131158 | lncRNA | downstream | 37341 | 4922800 ~ 4922897 (-) | True | G97331 |
| TU131162 | lncRNA | downstream | 98563 | 4860886 ~ 4861675 (-) | True | G97335 |
| TU130976 | lncRNA | downstream | 307931 | 4652024 ~ 4652307 (-) | True | G97188 |
| TU131197 | lncRNA | upstream | 18339 | 4981755 ~ 4982421 (-) | True | G97361 |
| TU131202 | lncRNA | upstream | 25524 | 4988940 ~ 4989339 (-) | True | G97365 |
| TU131209 | lncRNA | upstream | 68488 | 5031904 ~ 5032782 (-) | True | G97371 |
| TU131223 | lncRNA | upstream | 114996 | 5078412 ~ 5078625 (-) | True | G97384 |
| TU131224 | lncRNA | upstream | 116429 | 5079845 ~ 5080118 (-) | True | G97385 |
| XM_007228863.3 | mRNA | downstream | 14539 | 4924824 ~ 4945699 (-) | True | nagpa |
| XM_007228864.3 | mRNA | downstream | 51603 | 4899420 ~ 4908635 (-) | True | tp53inp1 |
| XM_007228866.3 | mRNA | downstream | 64731 | 4889175 ~ 4895507 (-) | False | ccne2 |
| XM_007228862.3 | mRNA | upstream | 23741 | 4987157 ~ 4988477 (-) | True | LOC103029284 |
| XM_007228858.3 | mRNA | upstream | 120834 | 5084250 ~ 5091582 (-) | True | c11h8orf37 |
| XM_022674149.1 | mRNA | upstream | 159525 | 5122941 ~ 5149382 (-) | True | LOC103035853 |
| XM_007228853.2 | mRNA | upstream | 188704 | 5152120 ~ 5161405 (-) | True | snrnp48 |
| XM_007228854.3 | mRNA | upstream | 188704 | 5152120 ~ 5161380 (-) | False | snrnp48 |
| XR_001518422.2 | other | downstream | 786031 | 4150003 ~ 4174207 (-) | False | LOC107197182 |
| XR_002650512.1 | other | downstream | 2688661 | 2270503 ~ 2271577 (-) | True | LOC111193410 |
| TU129943 | other | downstream | 3145320 | 1811838 ~ 1814918 (-) | False | LOC103031019 |
| XR_002650509.1 | other | downstream | 4527845 | 431659 ~ 432393 (-) | True | LOC111193405 |
| XR_002650507.1 | other | downstream | 4528572 | 431162 ~ 431666 (-) | True | LOC111193404 |
| trnas-aga_10 | other | upstream | 129470 | 5092886 ~ 5092967 (-) | True | trnas-aga_10 |
| TU131662 | other | upstream | 615146 | 5578562 ~ 5586666 (-) | True | G97717 |
| TU131666 | other | upstream | 627582 | 5590998 ~ 5593483 (-) | False | riiad1 |
| TU131741 | other | upstream | 995905 | 5959321 ~ 6012419 (-) | False | LOC111193431 |
| TU131744 | other | upstream | 1007433 | 5970849 ~ 6012419 (-) | False | LOC111193431 |
