Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC111193410 |
| gene name | NA |
| gene type | coding |
| species | mexican tetra (Astyanax mexicanus) |
| category of species | ornamental fish |
| Item | Value |
|---|---|
| chromosome id | NC_035907.1 |
| NCBI id | CM008310.1 |
| chromosome length | 11650534 |
| location | 2270503 ~ 2271577 (-) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_002650512.1 | True | 168 | ncRNA | 0.42 | 3 | 2270503 | 2271577 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ca14 | ca14 | coding | downstream | 207130 | 2029738 ~ 2063373 (-) |
| taf2 | taf2 | coding | downstream | 241761 | 1994076 ~ 2028742 (-) |
| enpp2 | enpp2,LOC107745056 | coding | downstream | 281460 | 1960734 ~ 1989043 (-) |
| tnfrsf11b | tnfrsf11b | coding | downstream | 431439 | 1821804 ~ 1839064 (-) |
| scgn | scgn,LOC105899305,LOC107663245,LOC106572986,LOC107747999 | coding | downstream | 696157 | 1541270 ~ 1574346 (-) |
| LOC111193409 | NA | coding | upstream | 25683 | 2297260 ~ 2299513 (-) |
| LOC103034089 | LOC107751901 | coding | upstream | 226488 | 2498065 ~ 2715556 (-) |
| LOC111193413 | NA | coding | upstream | 789142 | 3060719 ~ 3063719 (-) |
| LOC111193412 | NA | coding | upstream | 804893 | 3076470 ~ 3090133 (-) |
| LOC103027841 | NA | coding | upstream | 850341 | 3121918 ~ 3129164 (-) |
| G96665 | LOC106588695 | non-coding | downstream | 43006 | 2151966 ~ 2227497 (-) |
| G96556 | prpf3,LOC107677690,LOC107719195 | non-coding | downstream | 148807 | 2116600 ~ 2121696 (-) |
| G96548 | NA | non-coding | downstream | 185074 | 2023343 ~ 2085429 (-) |
| G96446 | NA | non-coding | downstream | 483943 | 1786275 ~ 1786560 (-) |
| G96407 | H3F3A,h3f3b,LOC105909691,LOC107388308,LOC101073377,LOC107572204,LOC103395674,LOC101167724 | non-coding | downstream | 783775 | 1434255 ~ 1486728 (-) |
| G96706 | NA | non-coding | upstream | 224047 | 2495624 ~ 2495978 (-) |
| G96754 | NA | non-coding | upstream | 795921 | 3067498 ~ 3086140 (-) |
| LOC111193414 | NA | non-coding | upstream | 799518 | 3071095 ~ 3072784 (-) |
| LOC111193415 | NA | non-coding | upstream | 824566 | 3096143 ~ 3097081 (-) |
| G96759 | NA | non-coding | upstream | 836205 | 3107782 ~ 3108132 (-) |
| LOC103031019 | NA | other | downstream | 455469 | 1811701 ~ 1815034 (-) |
| carmil1 | carmil1 | other | downstream | 492403 | 1582007 ~ 1778100 (-) |
| LOC103043490 | NA | other | downstream | 2004909 | 252340 ~ 265594 (-) |
| mboat1 | mboat1 | other | upstream | 1607119 | 3878696 ~ 3899248 (-) |
| LOC107197182 | NA | other | upstream | 1878426 | 4150003 ~ 4178426 (-) |
| dek | dek | other | upstream | 2172652 | 4444229 ~ 4453002 (-) |
| LOC103028279 | NA | other | upstream | 3269336 | 5540913 ~ 5573904 (-) |
| G97717 | NA | other | upstream | 3306985 | 5578562 ~ 5586666 (-) |
