G96446


Basic Information

Item Value
gene id G96446
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035907.1
NCBI id CM008310.1
chromosome length 11650534
location 1786275 ~ 1786560 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU129911
ctccgcaccgcacctaaaacccgcccgcgatgaaacgaaaccgaccctaaccgagcggatctcagctccgcaccgcacctaaaacccgcccgcgatgaaacgaaaccgaccctaaccgagcggatctcagctccgcaccgcacctaaaacccgcccgcgatgaagcgaaaccgactCTAACCCGCTCGTTTTCATCGCAGGACATTTTAGATGAAGAATGAGCGGATAGTTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU129911 True 232 lncRNA 0.58 2 1786275 1786560

Neighbor

gene id symbol gene type direction distance location
scgn scgn,LOC105899305,LOC107663245,LOC106572986,LOC107747999 coding downstream 211929 1541270 ~ 1574346 (-)
LOC103030072 NA coding downstream 280879 1501803 ~ 1505396 (-)
c11h16orf91 NA coding downstream 296035 1487339 ~ 1490240 (-)
c11h8orf33 LOC103028915 coding downstream 304522 1478526 ~ 1481753 (-)
anks3 anks3,LOC107747856,LOC107717876 coding downstream 309256 1458450 ~ 1477019 (-)
tnfrsf11b tnfrsf11b coding upstream 35244 1821804 ~ 1839064 (-)
enpp2 enpp2,LOC107745056 coding upstream 174174 1960734 ~ 1989043 (-)
taf2 taf2 coding upstream 207516 1994076 ~ 2028742 (-)
ca14 ca14 coding upstream 243178 2029738 ~ 2063373 (-)
LOC111193410 NA coding upstream 483943 2270503 ~ 2271577 (-)
G96407 H3F3A,h3f3b,LOC105909691,LOC107388308,LOC101073377,LOC107572204,LOC103395674,LOC101167724 non-coding downstream 299547 1434255 ~ 1486728 (-)
G96383 NA non-coding downstream 329419 1454970 ~ 1456856 (-)
G96358 rhot2 non-coding downstream 494750 1288043 ~ 1291525 (-)
G96355 NA non-coding downstream 504282 1277743 ~ 1281993 (-)
G96257 wdr90,LOC107747862,LOC107554221 non-coding downstream 559425 1224164 ~ 1226850 (-)
G96548 NA non-coding upstream 236783 2023343 ~ 2085429 (-)
G96556 prpf3,LOC107677690,LOC107719195 non-coding upstream 330040 2116600 ~ 2121696 (-)
G96665 LOC106588695 non-coding upstream 365406 2151966 ~ 2227497 (-)
G96706 NA non-coding upstream 709064 2495624 ~ 2495978 (-)
G96754 NA non-coding upstream 1280938 3067498 ~ 3086140 (-)
carmil1 carmil1 other downstream 8175 1582007 ~ 1778100 (-)
LOC103043490 NA other downstream 1520681 252340 ~ 265594 (-)
LOC103031019 NA other upstream 25141 1811701 ~ 1815034 (-)
mboat1 mboat1 other upstream 2092136 3878696 ~ 3899248 (-)
LOC107197182 NA other upstream 2363443 4150003 ~ 4178426 (-)
dek dek other upstream 2657669 4444229 ~ 4453002 (-)
LOC103028279 NA other upstream 3754353 5540913 ~ 5573904 (-)

Expression


Co-expression Network