RNA id: trnat-agu_38


Basic Information

Item Value
RNA id trnat-agu_38
length 74
RNA type tRNA
GC content 0.55
exon number 1
gene id trnat-agu_38
representative True

Chromosome Information

Item Value
chromosome id NW_019172695.1
NCBI id APWO02002293.1
chromosome length 373183
location 13869 ~ 13942 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence

GGCGCCGTGGCTTAGTTGGTTAAAGTGCCTGTCTAGTAAACAGGAGATcctgggttcgaatcccagcgGTGCCT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU395337 lncRNA upstream 31688 45630 ~ 45862 (-) True G287603
TU395338 lncRNA upstream 39997 53939 ~ 54187 (-) True G287604
TU395357 lncRNA upstream 130242 144184 ~ 148507 (-) True G287616
TU395352 lncRNA upstream 131059 145001 ~ 145794 (-) True G287614
TU395359 lncRNA upstream 165490 179432 ~ 179704 (-) True G287618
XM_022664399.1 mRNA upstream 324882 338824 ~ 346491 (-) True LOC103039499
trnar-ucu_32 other downstream 107 13673 ~ 13762 (-) True trnar-ucu_32
trnat-agu_37 other downstream 506 13290 ~ 13363 (-) True trnat-agu_37
trnat-agu_36 other downstream 1816 11980 ~ 12053 (-) True trnat-agu_36
trnar-ucu_31 other downstream 1996 11784 ~ 11873 (-) True trnar-ucu_31
trnat-agu_35 other downstream 2394 11402 ~ 11475 (-) True trnat-agu_35
trnar-ucu_33 other upstream 310 14252 ~ 14341 (-) True trnar-ucu_33
trnat-agu_39 other upstream 506 14448 ~ 14521 (-) True trnat-agu_39
trnar-ucu_34 other upstream 889 14831 ~ 14920 (-) True trnar-ucu_34
trnat-agu_40 other upstream 1085 15027 ~ 15100 (-) True trnat-agu_40
TU395417 other upstream 292448 306390 ~ 307501 (-) True G287664