RNA id: XM_022665997.1


Basic Information

Item Value
RNA id XM_022665997.1
length 4178
RNA type mRNA
GC content 0.51
exon number 13
gene id cep126
representative False

Chromosome Information

Item Value
chromosome id NW_019172850.1
NCBI id APWO02000117.1
chromosome length 3115925
location 3070236 ~ 3107407 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence

GTGCAGGTGTAGCGGTTGCTAGAGGAGACGCGTCTGTGGATACGGACATGGAGCGGCTGTTGCTGAGCGGGTAGAGGagctagatgctaagctaaGTGTTTAAACCGGTTTAAATTCAGCCCGTGTTCACACAGCTCTGTTGCACACTGCGGTTTCTGTTAGAATAGAGTTATTTACAGGTGTAGAGCGCGAGCAGGAGCGGCGGGGAGGCTTATTTAACTCAGATCCGGGGAGAATAGCGCAGTGTTAGAGCAGCACGGCTAGCATGACATAACAGCTCACAGTGCTGGCAGCCCGCAGAGCCTGCTGTTTATAACCCAGCCTGATCAGATCCTCCTGTTCAACCACAGCTCAGATCAGCTCTTATAACATTATAACTACTGTCACACCTCCTCCAGCTATCTCCAATCATCTCCAATCATCTCCAGATCCATCAGCACCACCTGCACCATGAGGAGACCCTTCCTGTTCAGCTGAAACTGAGAAGATCAGAGATATCTCCCATCTTCTGCTGGGGATGCAAAACCTGAAGGAACCTCTTTACTACTCAAACTTTAGGCCGGGTTTGGACGTAGAGCTGGATGATGATCGGGAGCTGCTGGTCGAGGAACAGAAGTCATGCAGAACTCGCGCCCGAAAATTCTGCTTGGAGACAAACCGCCGCAGAAAggctctggaggagaggaggaggcagTGGGATGTTCAGGAGCAGAGGTTGAGGGAGAAGATCCTGCAGCAGAGGAAGAAGAGGGTACAGGATGCTACAGAGCGATTTCAGAGAGCtcatctccctccatctctacGGAGGAGACCAGGTTCTGGTAAAAGAGTTCCTAACCTGGATGAAGCACTTAGACAGATTCATGGATCCCTGGGCTCTTATGTTCAGCATTCACTCATCAGCAGaaGCTGTACTCCCTCCCCTAAACCTCCAGGGGGCTCCAGTGGTCCTCACAGCAGGCGTGTGGTTTCTGCAGCCGAGGCCTACAGCAGACTCATGCAGGAGAGAAGCCTGAGTGAGTTCAAGAGCAGCCAGCTGATCTTCCTCAACCAGCTGCAGGAGACAGAGCACCAACCGCAGGAACACCCAGACACTCCGCCCAGCCCTTCAGAAAGCCTGTCTAGCCTGGACAGCCTGGAGAACGAGATCCCTCAGCAGGGTCACGGAACCAGCCCCGCCCGCTCCAGCTCCTTTCTGGACCCTCCAGGCATCCAGAACGTCCAAAATCCAGCTTCACCACAGCAGCTGAACCTGTTGACTCAGTCCAAGAGCTTTCTGGAGGAGGTATTAAGTCAGCAGGGCAGCCCCagttccagctccagctccccATCGCTTGGTGAATCAGCAGATTCGGCAGATTCAGCAGATGACGACCTCCAAAGTCTCCAAAGTCTCCAGGATCTCACACAAGCACTGGAGCTGTGCAACCTCAACGACCAATCAGAAAGCTTCTACACCCAGTCTACTCCCTGCTGCCAAAATGTGCACGCTCAGCAGGACCTCACCACTAATTCGGGACATATGGCTTACTGTTATGACAGCACTGTTCGCGGGAACGCTTCCAGAGAGTGCAAAGCGTTGCACGTTGAGCCAGATACCACACCTCTGGAATTCGCCAGCTTGACTCGACAGGAGCTGGGAAGAAAGTTGGAGGAGAAGTGTACTAAGCATCCATCTGAGAACTGTCCTTTTCAGCCAGTCAATGGATGCAGACACAAGAACAATTTATCCCAGGCTTCGTCCAGCGCCAGTCGGGTTGTTGCATCTAATGTGGACGCAGGTTCTTCAATACGATTTGGAGGCTCTTGTCATGCCTCGCAGCTTGATAGCTCTAATTCTGCAAATTCTCAGTTCTGTAAGAAGATTCCAGATGCTGATAAAGCCAATCAGAAGGAATCTAAACCCATTAACCACGAAGAAAAGTGCAGGAACGAAGATCCTTCCAACCTACGGGAAGAATGTTCCAATAGAAGAATCGTCGCCACTGCGTTCAAGTCTTCCAAGTCTTCCAATACATTCAATTCTTCCAGAACTGGAGAAGAATCTCACAAAACatcagaaaacactgcaaaCTATGGAGAGAACTCGAAGAACGAAGATCCTTCCAATCTACCCAATGAATTTACCAACCGAACTCTCGCCACTACTATGTCTTCCAAGCCTTCAAAGTCTTCTCGAACTGGCGAAGAACCTGACCAAACATCAAAAGCCTACTTAACGCCTACTACAACAACCAGATGCTCCGATGTGCGATTCCTCAAGGGAATACTCAAGAAGAACTCCAAGTATATGGTAGGAGATGCCAaatttacacaaacatacactgcAGGCAACTTCATCTTCACCAGACAAGTGGCCATGTCCATTCGTGACAGTATGGAGCTCACCAGAGCGAAGGTGCGAGAGCCGGAGAACGACAAGAGCGTGAAAAAGAAGCTTCGCTGGTTTGACGAGGTCAACGGCGATGAAGAAAACGTCAAAAGCAAACCAGGTCATCTACCTCAAAATATTCCATCTTCAATGGATGTAAACCACCAACAGGAGTTATATCAGTTGGCTTCTACAAACGCACCAACAGGAACACTAGGAAGGATTAGTTCTGCTACTGCTTCTTCTGCAACCAGTTCCACTCGACAAGCATGGACCGATGTTAAAACCCAAGATGAAGAACCAACACAGGAACCCAAGGAACCCAAAGAACCCAAAATTCAAAGGCCAGGACCTCGTATCGCTGGTCCTCGTATTCCTCGTAGAGTCTGCTCTGCCAGAAACACCATTTCAGGACCTACAGCGTCCCGAAACAGGAAAGGAACCGTGATCAGACCTCAGTCTGCAACCGAGGCTCAACGCGTCCTCAAAAACCAAGGCAAAGGCAAGACCCTGGTGCCTCGACCTCCTCCCAGATCTGATCAGGTTCTGGAGTCTCAATTCAACTCAGCCGAGCCCACCGTTTACATCACCACCAAGACGGCCTACAacccctgGGACAGTGACTGCCCCCACAACAAACCAGACAACACTCATCCAGACAACCAGCCCCCAGCATCTCACCATCACTTTCCCAGAGCTGAAGCTGAAGGTGCTCTACCGGCCCCGGCTCCACCCTCCTACGCCTACACCTACGAGACAGTGTCCAAAGGCATCTACGCCCTCTGCCAGCCCGAGGCCCAGGCGGGCAGCGCCAGGCGCCCGCTCCAGTTCAGAGAGAACGGCATCTGCCTGGATCGCACGCCAACCGACGAGGAGATCTCACTGCTGTGGCACGGAGTCCGCTCTGCCTTAGCCAGCAAAGAGGTAGGTGACCCTCGGAGCTTCCTGGCTCCCAGTGGCCCGTTGTCTGCTTTGCCTCAAGGTCGTGCCAATTTGTCCCATGTCACTATAAACGGTGATAGCCTGCTCAGCGGCGTCAAAGCCGTTACACGAATGGGCCAATTTTTCCTCTCTCCCTCCAACGTGAGAACTCCGGTGAGAAGACCCACTGTGGAGAGCAATATGGTGAAAAACAGAGACAAGAAACATCAGTTAATTTATCAGgCTAAAGTGCCAATAAGTGGATACTCAAGCAAAGCAGACCAGACTGCGCAGGATGAAGAGGTGTTGGACAGTGGTGTGCAGGTGGCGGTGGACGTGTCTCAGCTGCAGAGGGCTGGTGTGGTGCATCGTGGGCAGGTTTTTGGACtcagtgctctctctctggaggAGCAGAGACTGCTGCAGTCTCTGGACAGACTCAACCACCGCCTGCAGTATGTTCAGGACATGTCTGCAGGAAATACCGCACTGAAAGGAGTCTTCACGTTGGATTCTGCAAATAACCAGTCTCCCCAGACCGGTGAGGTTTTGGGTGGCACTCAGCGCAGGTACCACAACGGCTCAGCTGCTGAAAACCGCACCCGTTCACACAGACGCTACTGACTCCAGCTCCCAGAATGCACTTCTCTCCAGCCTCACCGCCTTCCAGCCTATCCCGGACTGCACTTTTAAGGACAACTTCTGCcccacatttttattatatggtGGATTATCACAGACAatgattttcatgttttaaaaaaatctgagaaCCTGCTGGTTCTGCACGTTTTGGCTCAACTGGTTATctgttatagaaaaaaaaatgcagattaaGCATAAcgtccttgtttctacacccattatctaTCTTAACATATAgcag

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU425065 lncRNA upstream 109427 2960605 ~ 2960810 (+) True G308782
TU425063 lncRNA upstream 155960 2913905 ~ 2914277 (+) True G308780
TU425041 lncRNA upstream 157987 2864578 ~ 2912250 (+) True G308769
TU425060 lncRNA upstream 168411 2901256 ~ 2901826 (+) True G308777
TU425040 lncRNA upstream 205956 2853499 ~ 2864281 (+) True G308768
XM_022665993.1 mRNA upstream 34417 3019159 ~ 3035820 (+) True LOC103038331
XM_022665992.1 mRNA upstream 60265 2994068 ~ 3009972 (+) True pex16
XM_022665994.1 mRNA upstream 833354 2221969 ~ 2236883 (+) True eif3m
XM_022665980.1 mRNA upstream 957253 2076601 ~ 2112984 (+) True cstf3
XM_007257770.3 mRNA upstream 1222653 1834951 ~ 1847584 (+) True LOC103031553
TU424927 other upstream 513668 2556327 ~ 2556569 (+) True G308680
TU424887 other upstream 732071 2319891 ~ 2338166 (+) True G308643
TU424747 other upstream 926274 2131079 ~ 2143963 (+) True G308535
TU424711 other upstream 1050106 2017464 ~ 2020131 (+) True G308506
TU424189 other upstream 2884162 185337 ~ 186075 (+) False G308090

Expression Profile