Gene
RNA
| Item | Value |
|---|---|
| RNA id | CI01000001_05969709_06015943.mRNA |
| length | 4314 |
| RNA type | mRNA |
| GC content | 0.50 |
| exon number | 23 |
| gene id | CI01000001_05969709_06015943 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CI01000001 |
| NCBI id | null |
| chromosome length | 13537560 |
| location | 5969428 ~ 6016133 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| species | grasscarp (Ctenopharyngodon idella) |
| id | name | namespace |
|---|---|---|
| GO:1903779 | regulation of cardiac conduction | biological_process |
| id | description |
|---|---|
| K05850 | ATP2B; P-type Ca2+ transporter type 2B |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU18423 | lncRNA | downstream | 29884 | 5924884 ~ 5939544 (-) | True | G16446 |
| TU18560 | lncRNA | downstream | 139772 | 5829347 ~ 5829656 (-) | True | G16573 |
| TU18543 | lncRNA | downstream | 249752 | 5719395 ~ 5719676 (-) | True | G16556 |
| TU18542 | lncRNA | downstream | 252400 | 5716823 ~ 5717028 (-) | True | G16555 |
| TU18540 | lncRNA | downstream | 279375 | 5689665 ~ 5690053 (-) | True | G16553 |
| TU18606 | lncRNA | upstream | 106944 | 6123077 ~ 6124878 (-) | True | G16613 |
| TU18644 | lncRNA | upstream | 251849 | 6267982 ~ 6268417 (-) | True | G16640 |
| TU18654 | lncRNA | upstream | 252942 | 6269075 ~ 6270348 (-) | True | G16650 |
| TU18657 | lncRNA | upstream | 268059 | 6284192 ~ 6284465 (-) | False | CI01000001_06285353_06286524 |
| TU18658 | lncRNA | upstream | 269778 | 6285911 ~ 6286155 (-) | True | CI01000001_06285353_06286524 |
| CI01000001_05945762_05955388.mRNA | mRNA | downstream | 14040 | 5945336 ~ 5955388 (-) | True | CI01000001_05945762_05955388 |
| CI01000001_05848734_05855468.mRNA | mRNA | downstream | 113623 | 5848633 ~ 5855805 (-) | True | CI01000001_05848734_05855468 |
| CI01000001_05760403_05789161.mRNA | mRNA | downstream | 180267 | 5760318 ~ 5789161 (-) | True | CI01000001_05760403_05789161 |
| CI01000001_05753118_05757768.mRNA | mRNA | downstream | 211026 | 5753031 ~ 5758402 (-) | True | CI01000001_05753118_05757768 |
| CI01000001_05738554_05751605.mRNA | mRNA | downstream | 217823 | 5738127 ~ 5751605 (-) | True | CI01000001_05738554_05751605 |
| CI01000001_06037150_06039894.mRNA | mRNA | upstream | 21000 | 6037133 ~ 6039894 (-) | True | CI01000001_06037150_06039894 |
| CI01000001_06044481_06052838.mRNA | mRNA | upstream | 27376 | 6043509 ~ 6054128 (-) | True | CI01000001_06044481_06052838 |
| CI01000001_06071846_06084571.mRNA | mRNA | upstream | 55538 | 6071671 ~ 6085181 (-) | True | CI01000001_06071846_06084571 |
| CI01000001_06104303_06118257.mRNA | mRNA | upstream | 87961 | 6104094 ~ 6118421 (-) | True | CI01000001_06104303_06118257 |
| CI01000001_06126262_06133051.mRNA | mRNA | upstream | 109643 | 6125776 ~ 6133051 (-) | True | CI01000001_06126262_06133051 |
| TU18440 | other | downstream | 739843 | 5222777 ~ 5229585 (-) | True | G16462 |
| TU18272 | other | downstream | 1011586 | 4950689 ~ 4957842 (-) | True | G16332 |
| TU17581 | other | downstream | 1168033 | 4800901 ~ 4801395 (-) | True | G15736 |
| TU17476 | other | downstream | 1241221 | 4614175 ~ 4618357 (-) | True | G15639 |
| TU18669 | other | upstream | 327971 | 6344104 ~ 6347955 (-) | True | G16664 |
| TU18776 | other | upstream | 568347 | 6584480 ~ 6615589 (-) | False | G16753 |
| TU19958 | other | upstream | 821392 | 6837525 ~ 6890414 (-) | False | G17789 |
| TU19985 | other | upstream | 919944 | 6936077 ~ 6937223 (-) | True | CI01000001_06932075_06937182 |
| TU20141 | other | upstream | 1235178 | 7251311 ~ 7253254 (-) | False | G17911 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| zebrafish (Danio rerio) | TCONS_00044018 | False | 4576 | mRNA | 0.51 | 21 | NC_007134.7 | 19838130 ~ 19933625 (-) |
