RNA id: TU68092


Basic Information

Item Value
RNA id TU68092
length 1031
RNA type TUCP
GC content 0.53
exon number 5
gene id G59811
representative True

Chromosome Information

Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 14862397 ~ 14887464 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

GCTTGGGTGTAGGCCTTCAGAGCAATGCATACTGAATGGACCAAGTGCTAACACATGGAGGTCAAAATTGGTGTCCTCCAAGTGAACAATAAACTTAACAGCAATTTTCTGGAAGCCTGTGTGCTCACTACGACATGCACACAACAAGAAGCAAGCGACTCACAAACAATGCCACAAACACCTCTTTGTCATGTTCTGCCGCTTTGCTGTCATGCACCTCCTCGTGGTCCTGGGACACCAGGGGCAGGCTGGTGTCGTGAATGTGATTGTGGTTGTGACGGAAGCTGCCCAGGCTGTTGACAGAGTGGTTCCGATGGAAAAGGCCCTCTTTCTCATCATTGGGGTGACTGTGTTTGAGCAGAAGGGCTCGCAGCACGTTGGCTCGGTCTTCGGCTCTGATTTGGTCCGAGATGATCATGGTTTCCACCAGCAAGTGGGCGATGCCAGGCAGTGTGGTTTGATCCAGATCTAGCATTATGGCACCATGTGTGATGGTCCTGCGGAGCTCCAGCAGACTACGGAAGGACAGCGAGGCCACGTGCGGTTTACCCCAGCGATCCGTCTCCTCCTCCACGTCTTCCTCAAACTTGATCCAACGTGCCGTCTCTTTCCAGCGCATCTCCTGGTTCTTATCCACTATCAGCTCATTGAGCTCCACAAACCCTCATGAGTTTTCTTGTCCATCCTCTTCCTCCTCTTCAGACTAGAAAGAGGGGGTGAGCTATTGCTGGTTCGTGGTAATTGACAGCGTGATGATTTCTTGACGAGGTGACGTCTAACCCCAGGATTATCCTCAAAACGATGACTTTTCATGTCATCCAGGTCAGCACTGGCAAGCATCTGCGCCTCTGCTTCGTCTGTAGGTACTTTCTGGTAGACCGCAGTCTCCATGGCAGTCATGCTGCCTATGCAGATGCGTTCTCGTAGGTCGTAGCTGGTTCGCTGGGCTCCAGCCAGCCGGTGGACGGGCTTCCTGCGAAACCAGCCTCGTGTTGTCATAGTGGCAGGCTCTGGAGAAGGACTAAACCTGT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU68074 lncRNA downstream 48113 14814079 ~ 14814284 (-) True G59794
TU68045 lncRNA downstream 126116 14736017 ~ 14736281 (-) True G59768
TU68031 lncRNA downstream 146065 14716118 ~ 14716332 (-) True G59754
TU67858 lncRNA downstream 151204 14614098 ~ 14711193 (-) True G59590
TU67851 lncRNA downstream 178245 14682869 ~ 14684152 (-) True G59583
TU68104 lncRNA upstream 1612 14889076 ~ 14891213 (-) False G59818
TU68101 lncRNA upstream 2773 14890237 ~ 14891213 (-) True G59818
TU68108 lncRNA upstream 89225 14976689 ~ 14977258 (-) True G59821
TU68190 lncRNA upstream 203490 15090954 ~ 15091746 (-) True G59898
TU68191 lncRNA upstream 205010 15092474 ~ 15092737 (-) True G59899
CI01000009_14776978_14779978.mRNA mRNA downstream 80444 14776859 ~ 14781953 (-) True CI01000009_14776978_14779978
CI01000009_14763341_14773678.mRNA mRNA downstream 88716 14763212 ~ 14773681 (-) True CI01000009_14763341_14773678
CI01000009_14626182_14652953.mRNA mRNA downstream 209138 14625831 ~ 14653259 (-) True CI01000009_14626182_14652953
CI01000009_14476688_14573629.mRNA mRNA downstream 288768 14475724 ~ 14573629 (-) False CI01000009_14476688_14573629
CI01000009_14342067_14344332.mRNA mRNA downstream 517463 14341987 ~ 14344934 (-) True CI01000009_14342067_14344332
CI01000009_14905408_14907785.mRNA mRNA upstream 17025 14904489 ~ 14908077 (-) True CI01000009_14905408_14907785
CI01000009_14961220_14973307.mRNA mRNA upstream 73516 14960980 ~ 14973405 (-) True CI01000009_14961220_14973307
CI01000009_14974529_14974816.mRNA mRNA upstream 86578 14974042 ~ 14975420 (-) True CI01000009_14974529_14974816
CI01000009_15229965_15235247.mRNA mRNA upstream 342193 15229657 ~ 15235528 (-) True CI01000009_15229965_15235247
CI01000009_15301177_15304489.mRNA mRNA upstream 413633 15301097 ~ 15304500 (-) True CI01000009_15301177_15304489
TU67748 other downstream 824524 14033564 ~ 14037873 (-) True G59490
TU67750 other downstream 883783 13975388 ~ 13978614 (-) True CI01000009_13975122_13976026
TU67286 other downstream 2572879 12288217 ~ 12289518 (-) False G59097
TU67287 other downstream 2573420 12288217 ~ 12288977 (-) True G59097
TU64878 other downstream 6001834 8858152 ~ 8860563 (-) True CI01000009_08858198_08860555
TU68236 other upstream 244640 15132104 ~ 15132503 (-) True G59941
TU68714 other upstream 488796 15376260 ~ 15443047 (-) True G60362
TU68711 other upstream 759311 15646775 ~ 15651888 (-) True G60359

Expression Profile