RNA id: CI01000013_10335904_10336688.mRNA



Basic Information


Item Value
RNA id CI01000013_10335904_10336688.mRNA
length 370
RNA type mRNA
GC content 0.41
exon number 2
gene id CI01000013_10335904_10336688
representative True

Chromosome Information


Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 10335904 ~ 10336896 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


ATGAAGCAGAACATCTCTGTTAATAGATGCTCTTGTATAGTTAAAGAGCTCCAGCGATTACCACTACAGGAGGGCATTCTGGAGAGAAAAGCTCACTTTCTGCTTGTCTTGGCCGTGGCAGGAGATGTGAAGTCATGGGATATGAGATATAACTGTGCCTAGAGTGTGTATGTGCGTATACAAGTGCGATTATGAGGCTGTGACAGATATATGGGGTCAGATTGTTTCATCTATATTACATAACAAATATTGAACTTGTGTTTAACCCTTAAATGGTTTTTGTATCCTGAGGGATGCAGACATTTGAGAGCATGGGGGAGGGACAGTGAGTGAGTGGGACCAATTTCTGAAAAAAAATAATACACTATGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU95908 lncRNA upstream 48594 10286011 ~ 10287310 (+) True G84299
TU95898 lncRNA upstream 81645 10253174 ~ 10254259 (+) True G84289
TU95874 lncRNA upstream 148247 10186533 ~ 10187657 (+) True G84265
TU95781 lncRNA upstream 208152 10123760 ~ 10127752 (+) True G84202
TU95823 lncRNA upstream 218050 10117614 ~ 10117854 (+) True G84242
TU95913 lncRNA downstream 602 10337498 ~ 10339002 (+) True G84304
TU95932 lncRNA downstream 11964 10348860 ~ 10350255 (+) True G84323
TU95933 lncRNA downstream 17787 10354683 ~ 10356731 (+) True G84324
TU95934 lncRNA downstream 20862 10357758 ~ 10380783 (+) True G84325
TU95975 lncRNA downstream 125924 10462820 ~ 10463073 (+) True G84364
CI01000013_10261599_10283287.mRNA mRNA upstream 51937 10260271 ~ 10283967 (+) True CI01000013_10261599_10283287
CI01000013_09681047_09683275.mRNA mRNA upstream 652471 9681047 ~ 9683433 (+) True CI01000013_09681047_09683275
CI01000013_09430170_09443518.mRNA mRNA upstream 891881 9430170 ~ 9444023 (+) True CI01000013_09430170_09443518
CI01000013_09279917_09290301.mRNA mRNA upstream 1045144 9279917 ~ 9290760 (+) True CI01000013_09279917_09290301
CI01000013_09243644_09260619.mRNA mRNA upstream 1075285 9243644 ~ 9260619 (+) True CI01000013_09243644_09260619
CI01000013_10502138_10525511.mRNA mRNA downstream 163794 10500690 ~ 10525674 (+) True CI01000013_10502138_10525511
CI01000013_10586449_10594082.mRNA mRNA downstream 248922 10585818 ~ 10594442 (+) True CI01000013_10586449_10594082
CI01000013_10756927_10790192.mRNA mRNA downstream 420031 10756927 ~ 10790489 (+) False CI01000013_10756927_10790192
CI01000013_10808688_10819703.mRNA mRNA downstream 471792 10808688 ~ 10819925 (+) True CI01000013_10808688_10819703
CI01000013_10821530_10827412.mRNA mRNA downstream 484634 10821530 ~ 10827977 (+) True CI01000013_10821530_10827412
TU95833 other upstream 119942 10215127 ~ 10215962 (+) True G84250
TU95794 other upstream 256568 10076454 ~ 10079336 (+) True G84215
TU95773 other upstream 299111 10030608 ~ 10036793 (+) False G84194
TU95556 other upstream 733669 9601611 ~ 9602235 (+) False G84005
TU96004 other downstream 435390 10772286 ~ 10784757 (+) False CI01000013_10756927_10790192
TU96453 other downstream 1833093 12169989 ~ 12170818 (+) True G84768
TU96501 other downstream 1848046 12184942 ~ 12201975 (+) True G84790
TU96598 other downstream 2028153 12365049 ~ 12375905 (+) True G84864

Expression Profile