RNA id: TU97698


Basic Information

Item Value
RNA id TU97698
length 341
lncRNA type inter_gene
GC content 0.39
exon number 1
gene id G85811
representative True

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 12277099 ~ 12277439 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

TTACCCGTAAGAAAACTCAGATGAACCGTAATAATGTGCATGACACTTTCTCTTGTTCATTACTGCAGTGATCAGTAACACTCAGACCATAATACCCGTCAAAATAAGAGAGTCCCTCTTTGTAAGACGGATAATGCAGACCTTATATATAATTACACCCACAAAAATATGTACAAAACAAATGAAAAGATTAATCACAATAAAGTCTGTTACATTTTGTAAACGGGGTGTTTTTATCACACAAACAGCTTCAGCTCAATTCCCGCCCCCGATTGTAAAGCAAAACATGATTGGTTGTAGCGAGAGTGTGCTGCGATTGGTCAGTGCAACGTGGCCGTTAT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU97670 lncRNA downstream 1240 12272630 ~ 12275859 (-) True G85790
TU97693 lncRNA downstream 41586 12235134 ~ 12235513 (-) True G85807
TU97690 lncRNA downstream 41636 12235134 ~ 12235463 (-) False G85807
TU97688 lncRNA downstream 43333 12233546 ~ 12233766 (-) True G85806
TU97680 lncRNA downstream 113161 12163697 ~ 12163938 (-) True G85798
TU97699 lncRNA upstream 1698 12279137 ~ 12279524 (-) True G85812
TU97703 lncRNA upstream 21691 12299130 ~ 12374694 (-) True G85815
TU97656 lncRNA upstream 118302 12395741 ~ 12396400 (-) True G85787
CI01000013_12266959_12272152.mRNA mRNA downstream 4947 12266607 ~ 12272152 (-) True CI01000013_12266959_12272152
CI01000013_12245311_12259172.mRNA mRNA downstream 17927 12244844 ~ 12259172 (-) True CI01000013_12245311_12259172
CI01000013_12180062_12209369.mRNA mRNA downstream 67730 12179539 ~ 12209369 (-) True CI01000013_12180062_12209369
CI01000013_12139350_12155896.mRNA mRNA downstream 118833 12139266 ~ 12158266 (-) True CI01000013_12139350_12155896
CI01000013_12125008_12129746.mRNA mRNA downstream 146787 12124523 ~ 12130312 (-) True CI01000013_12125008_12129746
CI01000013_12284334_12294513.mRNA mRNA upstream 6143 12283582 ~ 12294513 (-) True CI01000013_12284334_12294513
CI01000013_12327420_12330914.mRNA mRNA upstream 49647 12327086 ~ 12330944 (-) True CI01000013_12327420_12330914
CI01000013_12340516_12350128.mRNA mRNA upstream 63005 12340444 ~ 12350136 (-) True CI01000013_12340516_12350128
CI01000013_12365448_12375915.mRNA mRNA upstream 87445 12364884 ~ 12375915 (-) True CI01000013_12365448_12375915
CI01000013_12410747_12418599.mRNA mRNA upstream 133130 12410569 ~ 12418599 (-) True CI01000013_12410747_12418599
TU97461 other downstream 675843 11600778 ~ 11600941 (-) True G85628
TU97193 other downstream 1241633 11035032 ~ 11035466 (-) True G85401
TU96958 other downstream 1681762 10592204 ~ 10595337 (-) True G85188
TU96941 other downstream 1704659 10572377 ~ 10572440 (-) True G85180
TU96930 other downstream 1796399 10479861 ~ 10480700 (-) True G85170

Expression Profile