Gene
RNA
| Item | Value |
|---|---|
| RNA id | CI01000016_04649660_04661928.mRNA |
| length | 3029 |
| RNA type | mRNA |
| GC content | 0.47 |
| exon number | 10 |
| gene id | CI01000016_04649660_04661928 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CI01000016 |
| NCBI id | null |
| chromosome length | 12175457 |
| location | 4649578 ~ 4663555 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| species | grasscarp (Ctenopharyngodon idella) |
| id | name | namespace |
|---|---|---|
| GO:0006468 | protein phosphorylation | biological_process |
| id | description |
|---|---|
| K03083 | GSK3B; glycogen synthase kinase 3 beta |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU108615 | lncRNA | upstream | 95568 | 4547513 ~ 4554010 (+) | True | G95489 |
| TU108611 | lncRNA | upstream | 103506 | 4537680 ~ 4546072 (+) | True | G95485 |
| TU108816 | lncRNA | upstream | 132484 | 4516876 ~ 4517094 (+) | True | G95673 |
| TU108560 | lncRNA | upstream | 205931 | 4442438 ~ 4443647 (+) | True | G95434 |
| TU108798 | lncRNA | upstream | 230964 | 4417888 ~ 4418614 (+) | True | G95659 |
| TU108838 | lncRNA | downstream | 150626 | 4814181 ~ 4927792 (+) | False | G95692 |
| TU108852 | lncRNA | downstream | 188486 | 4852041 ~ 4852964 (+) | True | G95703 |
| TU108839 | lncRNA | downstream | 228541 | 4892096 ~ 4927792 (+) | False | G95692 |
| TU108840 | lncRNA | downstream | 261131 | 4924686 ~ 4927792 (+) | True | G95692 |
| TU108844 | lncRNA | downstream | 270148 | 4933703 ~ 4935758 (+) | True | CI01000016_04932388_04935392 |
| CI01000016_04590667_04633139.mRNA | mRNA | upstream | 15128 | 4590667 ~ 4634450 (+) | True | CI01000016_04590667_04633139 |
| CI01000016_04557546_04579200.mRNA | mRNA | upstream | 70077 | 4557546 ~ 4579501 (+) | True | CI01000016_04557546_04579200 |
| CI01000016_04507602_04509233.mRNA | mRNA | upstream | 140345 | 4506935 ~ 4509233 (+) | True | CI01000016_04507602_04509233 |
| CI01000016_04491680_04506535.mRNA | mRNA | upstream | 142772 | 4491376 ~ 4506806 (+) | True | CI01000016_04491680_04506535 |
| CI01000016_04428669_04441464.mRNA | mRNA | upstream | 208114 | 4428669 ~ 4441464 (+) | False | CI01000016_04428669_04441464 |
| CI01000016_04666701_04684512.mRNA | mRNA | downstream | 2367 | 4665922 ~ 4684837 (+) | True | CI01000016_04666701_04684512 |
| CI01000016_04743905_04763216.mRNA | mRNA | downstream | 80266 | 4743821 ~ 4763507 (+) | True | CI01000016_04743905_04763216 |
| CI01000016_04770017_04795909.mRNA | mRNA | downstream | 106462 | 4770017 ~ 4797509 (+) | True | CI01000016_04770017_04795909 |
| CI01000016_04815074_04817608.mRNA | mRNA | downstream | 151519 | 4815074 ~ 4817889 (+) | True | CI01000016_04815074_04817608 |
| CI01000016_04826146_04828890.mRNA | mRNA | downstream | 162533 | 4826088 ~ 4829158 (+) | True | CI01000016_04826146_04828890 |
| TU108786 | other | upstream | 375673 | 4272636 ~ 4273905 (+) | True | G95648 |
| TU108565 | other | upstream | 785721 | 3862175 ~ 3862305 (+) | True | G95439 |
| TU106281 | other | upstream | 3722046 | 905400 ~ 927532 (+) | True | G93406 |
| TU108629 | other | downstream | 171003 | 4834558 ~ 4836655 (+) | True | G95503 |
| TU108946 | other | downstream | 556325 | 5219880 ~ 5225941 (+) | True | G95792 |
| TU109033 | other | downstream | 742314 | 5405869 ~ 5407863 (+) | False | CI01000016_05405791_05407797 |
| TU109031 | other | downstream | 743193 | 5406748 ~ 5406829 (+) | True | G95870 |
| TU109637 | other | downstream | 2497086 | 7160641 ~ 7161290 (+) | True | G96389 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| zebrafish (Danio rerio) | TCONS_00019482 | False | 2971 | mRNA | 0.48 | 10 | NC_007127.7 | 11242443 ~ 11292148 (+) |
| bowfin (Amia calva) | TU119027 | False | 771 | TUCP | 0.59 | 4 | CM030132.1 | 2090529 ~ 2093238 (-) |
| tiger barb (Puntius tetrazona) | TU119027 | True | 534 | lncRNA | 0.35 | 2 | NC_056709.1 | 9699451 ~ 9725103 (-) |
