RNA id: CI01000024_02849288_02866286.mRNA


Basic Information

Item Value
RNA id CI01000024_02849288_02866286.mRNA
length 756
RNA type mRNA
GC content 0.48
exon number 4
gene id CI01000024_02849288_02866286
representative True

Chromosome Information

Item Value
chromosome id CI01000024
NCBI id null
chromosome length 8644187
location 2849100 ~ 2866404 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

ACCTGTCTGGAGACCCCCACCCTGCCAAGCCAGTATGTCTTTTTTTAACGACCTGCTGACAGATTTATGCATCTGGAAAAGGAGCGAGGCAGAGATCTAAACGGTCAAGCGGTTCACCATGGCAATAGAGGAGTTAATTGTCCATCAAGGGCAGATATATGTTCTCTGGACAGAGTGGGAATGTGTGGACTACCGTTGCTTTCCATTCACGAATGTTTACGAAGAGCAGGGAGCTGCAATCCTGCGTGAGGTGGCAATTCAAACAACTGATGGCGCGAGAAACGGCCGTTGGCAAATAACAGCCGGTGGGAAAGGAAAACGCTCAGGTGTTTCGTTTCTACGGTCAGACTATGGAGCCCAGATGCGGCTTACTCTACTCAAGAATGAGCCTCCCCTACCCAGGCCTCTCTATTGTATGCTCATGCCTGTCACTGGAGGCCCTGGAGGTTTTAGGGGCCTCCCACCTTTTATCCCTTGCTTCCCATTGTGGAACGTGGGCTGGGGTCACACCACTGTAACAGAGCCTCACGTTCAGAGGAAGCTTGTCTCTTTTGTTTCATCCTGGTGAATGGAGCTGCTTTATTTTTAAGTGTTGGGGCAGTTCCACATGGTCCCCCCTTCACTAACATCACTCTCCTACTGTGACAACTCAATTCAACATGAATAGGCTTCTTAATCATTCACCTGATGCTTCGCTTTCAACAAGCATGTGTTGCATGATGCTCATAAAGTCCTCTAAAACAGTGAAACAATAAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU140020 lncRNA downstream 54278 2794420 ~ 2794822 (-) True G123313
TU140033 lncRNA downstream 54832 2793903 ~ 2794268 (-) True G123326
TU140025 lncRNA downstream 55882 2793014 ~ 2793218 (-) True G123318
TU140047 lncRNA downstream 56334 2792337 ~ 2792766 (-) True G123340
TU140026 lncRNA downstream 57426 2791446 ~ 2791674 (-) True G123319
TU140133 lncRNA upstream 78742 2945146 ~ 2945495 (-) False CI01000024_02939122_02964449
TU140151 lncRNA upstream 86132 2952536 ~ 2952774 (-) True G123439
TU140139 lncRNA upstream 89532 2955936 ~ 2956249 (-) True CI01000024_02939122_02964449
TU140158 lncRNA upstream 104111 2970515 ~ 2970722 (-) True G123446
TU140159 lncRNA upstream 104397 2970801 ~ 2971023 (-) True G123447
CI01000024_02829108_02838763.mRNA mRNA downstream 9904 2828646 ~ 2839196 (-) True CI01000024_02829108_02838763
CI01000024_02771915_02777060.mRNA mRNA downstream 72040 2771806 ~ 2777060 (-) True CI01000024_02771915_02777060
CI01000024_02761265_02771248.mRNA mRNA downstream 77852 2760852 ~ 2771248 (-) True CI01000024_02761265_02771248
CI01000024_02712596_02739960.mRNA mRNA downstream 109140 2711873 ~ 2739960 (-) True CI01000024_02712596_02739960
CI01000024_02659912_02681156.mRNA mRNA downstream 165001 2659660 ~ 2684099 (-) False CI01000024_02659912_02681156
CI01000024_02939122_02964449.mRNA mRNA upstream 71979 2938383 ~ 2964449 (-) False CI01000024_02939122_02964449
CI01000024_03048421_03049271.mRNA mRNA upstream 181760 3048164 ~ 3049529 (-) False CI01000024_03048421_03049271
CI01000024_03060967_03068650.mRNA mRNA upstream 194408 3060812 ~ 3069706 (-) True CI01000024_03060967_03068650
CI01000024_03208565_03262749.mRNA mRNA upstream 342161 3208565 ~ 3262749 (-) True CI01000024_03208565_03262749
CI01000024_03284853_03286057.mRNA mRNA upstream 417806 3284210 ~ 3286057 (-) True CI01000024_03284853_03286057
TU139935 other downstream 294064 2547460 ~ 2555036 (-) True G123233
TU137850 other downstream 2022249 823733 ~ 826851 (-) True G121380
TU140468 other upstream 1069638 3936042 ~ 3937057 (-) True G123701
TU142441 other upstream 4490833 7357237 ~ 7357595 (-) False G125457
TU142437 other upstream 4491301 7357705 ~ 7358104 (-) False G125457
TU142439 other upstream 4491350 7357754 ~ 7358104 (-) True G125457
TU142839 other upstream 5109263 7975667 ~ 7976047 (-) False G125798

Expression Profile