RNA id: CI01000029_01353955_01354599.mRNA


Basic Information

Item Value
RNA id CI01000029_01353955_01354599.mRNA
length 524
RNA type mRNA
GC content 0.48
exon number 2
gene id CI01000029_01353955_01354599
representative False

Chromosome Information

Item Value
chromosome id CI01000029
NCBI id null
chromosome length 9486966
location 1353536 ~ 1354599 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

TTTTACCAATCCCAGCATAGAGCACTGTTTAAAGCTGACCTCTGCATACTCCCACTTCCTGAAAGAGAGCGGTCAACCTGAGATCACCACATGCCACTCACGTACAGCCATCACCGTCGATTACATCTTCTACTCCGCAGCTCTGGGGGATGTGATGGCTCAAGCAGTGCAGTACATTCAACAGCAAAATTTCTGCTGCTGCTGGTTACCATGGTACTGTTTTCTTTCCCCCCTCACTTACCCAGAATGCAGTGTGCCACCAGAGAAGGGTCTGCAGCTGCTGGGTAGGTTAGCCCTGGTGGGGAAAGATGAACTCCAGGAGGTTAACGGCCTTCCCAACCAGCATAACTCCTCTGACCACCTGCCGCTTTTGACACGCTTCCGTCTGCACCCTTGAGCTGATGGCTGACGGAACGAAAAGGGTTTGCGATTATCATACAGCCTTTAAATCCTTTTGTGGCCAACAAACTCGCAGTACAATGTAAACAGTTTTTTTTTTTTTTTTTTTCACACCAGCAAATAAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU173532 lncRNA downstream 164675 1187612 ~ 1189153 (-) True G152776
TU173515 lncRNA downstream 272548 1078258 ~ 1081280 (-) True G152759
TU173275 lncRNA downstream 702060 649876 ~ 651768 (-) True G152551
TU173283 lncRNA downstream 827939 525587 ~ 525889 (-) True G152557
TU173282 lncRNA downstream 828591 524840 ~ 525237 (-) True G152556
TU173686 lncRNA upstream 84910 1439509 ~ 1439718 (-) True G152918
TU173702 lncRNA upstream 100193 1454792 ~ 1455019 (-) True G152933
TU173704 lncRNA upstream 102366 1456965 ~ 1457196 (-) True G152935
TU173708 lncRNA upstream 110568 1465167 ~ 1465472 (-) True G152939
TU173733 lncRNA upstream 170214 1524813 ~ 1525026 (-) True G152964
CI01000029_01294841_01297423.mRNA mRNA downstream 56405 1294724 ~ 1297423 (-) True CI01000029_01294841_01297423
CI01000029_01293143_01293964.mRNA mRNA downstream 59782 1292544 ~ 1294046 (-) False CI01000029_01293143_01293964
CI01000029_01252971_01257256.mRNA mRNA downstream 96572 1252799 ~ 1257256 (-) True CI01000029_01252971_01257256
CI01000029_01245770_01245984.mRNA mRNA downstream 107844 1245518 ~ 1245984 (-) True CI01000029_01245770_01245984
CI01000029_01198414_01198698.mRNA mRNA downstream 154334 1198345 ~ 1199494 (-) True CI01000029_01198414_01198698
CI01000029_01576996_01590356.mRNA mRNA upstream 221740 1576339 ~ 1592127 (-) True CI01000029_01576996_01590356
CI01000029_01600901_01604213.mRNA mRNA upstream 246133 1600732 ~ 1605205 (-) True CI01000029_01600901_01604213
CI01000029_01645824_01650080.mRNA mRNA upstream 291116 1645715 ~ 1650080 (-) True CI01000029_01645824_01650080
CI01000029_01688033_01695159.mRNA mRNA upstream 333258 1687857 ~ 1695233 (-) True CI01000029_01688033_01695159
CI01000029_01750119_01750442.mRNA mRNA upstream 395259 1749858 ~ 1750701 (-) True CI01000029_01750119_01750442
TU173481 other downstream 59705 1292249 ~ 1294123 (-) True CI01000029_01293143_01293964
TU173923 other upstream 1237567 2592459 ~ 2592802 (-) True G153138
TU174756 other upstream 1894178 3248777 ~ 3286554 (-) True G153891
TU174823 other upstream 2351624 3706223 ~ 3707252 (-) True CI01000029_03698769_03707177
TU175091 other upstream 3105744 4472400 ~ 4477212 (-) True G154201
TU175317 other upstream 3631509 4986108 ~ 4987425 (-) False G154415

Expression Profile