RNA id: TU177569



Basic Information


Item Value
RNA id TU177569
length 201
lncRNA type inter_gene
GC content 0.46
exon number 1
gene id G156396
representative True

Chromosome Information


Item Value
chromosome id CI01000029
NCBI id null
chromosome length 9486966
location 6852124 ~ 6852324 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


ACGTCTATTTCAGGGAAGGCCTTGTGTATTTCAGCAGGACAATGCAAAACCACATACTGCAGCTATTACAACAGCATGGCTTCGTCGTAGAAGAGTCCGGGTGCTGAATTGGTCTGCCTGCAGTCCAGATCTTTCACCTATAGAGAAAAATACATCAAAGACGACCACAAACTCTTCAGCAGCTGGAAACCTATATCAGGC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU177492 lncRNA downstream 18428 6786413 ~ 6833696 (-) False G156323
TU177491 lncRNA downstream 18428 6833628 ~ 6833696 (-) True G156323
TU177489 lncRNA downstream 18428 6833628 ~ 6833696 (-) False G156323
TU177490 lncRNA downstream 18428 6833628 ~ 6833696 (-) True G156323
TU177551 lncRNA downstream 90810 6761064 ~ 6761314 (-) True G156380
TU177576 lncRNA upstream 8630 6860954 ~ 6861244 (-) True G156400
TU177577 lncRNA upstream 9107 6861431 ~ 6861757 (-) True G156401
TU177586 lncRNA upstream 30263 6882587 ~ 6886699 (-) True G156410
TU177592 lncRNA upstream 40890 6893214 ~ 6902216 (-) True G156416
TU177641 lncRNA upstream 168762 7021086 ~ 7021734 (-) True G156459
CI01000029_06832914_06833074.mRNA mRNA downstream 19050 6832709 ~ 6833074 (-) False CI01000029_06832914_06833074
CI01000029_06798103_06806327.mRNA mRNA downstream 45278 6798040 ~ 6806846 (-) True CI01000029_06798103_06806327
CI01000029_06739098_06769987.mRNA mRNA downstream 82137 6738714 ~ 6769987 (-) False CI01000029_06739098_06769987
CI01000029_06719634_06722376.mRNA mRNA downstream 128952 6719527 ~ 6723172 (-) True CI01000029_06719634_06722376
CI01000029_06689615_06698873.mRNA mRNA downstream 153251 6689537 ~ 6698873 (-) True CI01000029_06689615_06698873
CI01000029_06921800_06922750.mRNA mRNA upstream 68957 6921281 ~ 6923115 (-) True CI01000029_06921800_06922750
CI01000029_07332828_07336542.mRNA mRNA upstream 479971 7332295 ~ 7336542 (-) True CI01000029_07332828_07336542
CI01000029_07346183_07362585.mRNA mRNA upstream 493741 7346065 ~ 7362585 (-) True CI01000029_07346183_07362585
CI01000029_07388885_07402311.mRNA mRNA upstream 535920 7388244 ~ 7402678 (-) True CI01000029_07388885_07402311
CI01000029_07405933_07416452.mRNA mRNA upstream 553219 7405543 ~ 7416952 (-) True CI01000029_07405933_07416452
TU175317 other downstream 1864699 4986108 ~ 4987425 (-) False G154415
TU175314 other downstream 1864699 4986185 ~ 4987425 (-) True G154415
TU175091 other downstream 2374912 4472400 ~ 4477212 (-) True G154201
TU174823 other downstream 3144872 3706223 ~ 3707252 (-) True CI01000029_03698769_03707177
TU174756 other downstream 3565570 3248777 ~ 3286554 (-) True G153891
TU177741 other upstream 318043 7170367 ~ 7170951 (-) False G156542
TU177684 other upstream 514003 7366327 ~ 7369547 (-) False G156495
TU177685 other upstream 514003 7366327 ~ 7369547 (-) False G156495

Expression Profile