RNA id: TU177645


Basic Information

Item Value
RNA id TU177645
length 222
lncRNA type inter_gene
GC content 0.32
exon number 1
gene id G156463
representative True

Chromosome Information

Item Value
chromosome id CI01000029
NCBI id null
chromosome length 9486966
location 7028558 ~ 7028779 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

GAAATATTTAAAACAGTTCATGTGACTACAGTGGTTCAACCTTAATGTTATGAAGTGACGAGAATACTTTTTGTGCGACAAAAAAAAAAACCAACAAAAAAATAATGACTTTATTCAACAATATCTAGTGATGGGCGATTTCAAAACACTTCTTCATGAAGCTTCGAAGCTTTACGAATCTTTTGTTTCGAATCAGTGGTTCGTTCGAATTGTGTATCAAAC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU177641 lncRNA downstream 6824 7021086 ~ 7021734 (-) True G156459
TU177592 lncRNA downstream 126342 6893214 ~ 6902216 (-) True G156416
TU177586 lncRNA downstream 141859 6882587 ~ 6886699 (-) True G156410
TU177577 lncRNA downstream 166801 6861431 ~ 6861757 (-) True G156401
TU177576 lncRNA downstream 167314 6860954 ~ 6861244 (-) True G156400
TU177651 lncRNA upstream 8402 7037181 ~ 7037486 (-) True G156469
TU177655 lncRNA upstream 25650 7054429 ~ 7054771 (-) True G156473
TU177662 lncRNA upstream 36989 7065768 ~ 7066104 (-) False G156477
TU177659 lncRNA upstream 37063 7065842 ~ 7066104 (-) True G156477
TU177679 lncRNA upstream 83474 7112253 ~ 7112673 (-) True G156492
CI01000029_06921800_06922750.mRNA mRNA downstream 105443 6921281 ~ 6923115 (-) True CI01000029_06921800_06922750
CI01000029_06832914_06833074.mRNA mRNA downstream 195484 6832709 ~ 6833074 (-) False CI01000029_06832914_06833074
CI01000029_06798103_06806327.mRNA mRNA downstream 221712 6798040 ~ 6806846 (-) True CI01000029_06798103_06806327
CI01000029_06739098_06769987.mRNA mRNA downstream 258571 6738714 ~ 6769987 (-) False CI01000029_06739098_06769987
CI01000029_06719634_06722376.mRNA mRNA downstream 305386 6719527 ~ 6723172 (-) True CI01000029_06719634_06722376
CI01000029_07332828_07336542.mRNA mRNA upstream 303516 7332295 ~ 7336542 (-) True CI01000029_07332828_07336542
CI01000029_07346183_07362585.mRNA mRNA upstream 317286 7346065 ~ 7362585 (-) True CI01000029_07346183_07362585
CI01000029_07388885_07402311.mRNA mRNA upstream 359465 7388244 ~ 7402678 (-) True CI01000029_07388885_07402311
CI01000029_07405933_07416452.mRNA mRNA upstream 376764 7405543 ~ 7416952 (-) True CI01000029_07405933_07416452
CI01000029_07419676_07421496.mRNA mRNA upstream 390856 7419635 ~ 7422668 (-) True CI01000029_07419676_07421496
TU175317 other downstream 2041133 4986108 ~ 4987425 (-) False G154415
TU175314 other downstream 2041133 4986185 ~ 4987425 (-) True G154415
TU175091 other downstream 2551346 4472400 ~ 4477212 (-) True G154201
TU174823 other downstream 3321306 3706223 ~ 3707252 (-) True CI01000029_03698769_03707177
TU174756 other downstream 3742004 3248777 ~ 3286554 (-) True G153891
TU177741 other upstream 141588 7170367 ~ 7170951 (-) False G156542
TU177684 other upstream 337548 7366327 ~ 7369547 (-) False G156495
TU177685 other upstream 337548 7366327 ~ 7369547 (-) False G156495

Expression Profile