RNA id: TU176969


Basic Information

Item Value
RNA id TU176969
length 204
lncRNA type inter_gene
GC content 0.33
exon number 2
gene id G155860
representative True

Chromosome Information

Item Value
chromosome id CI01000029
NCBI id null
chromosome length 9486966
location 8596234 ~ 8597704 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

GATTCAATGACTCACTCATAAAGACTGCACTTGTTTCATTACTGGATTAATCAGTGTTTTTGAACGAATCTCTTGAATGAATGATTCAATGACTCACTCATAAAGACTTCACTTGTTTCATTACTGGATGAATCTGTGTTTTTGAACGAATCTCTTGAATGAATGATTCAATGACTCACTCATAAAGACTTCACTTGTTTCATT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU176962 lncRNA upstream 1093 8594562 ~ 8595141 (+) True G155853
TU176964 lncRNA upstream 2278 8593547 ~ 8593956 (+) True G155855
TU176960 lncRNA upstream 2973 8589386 ~ 8593261 (+) True G155851
TU176956 lncRNA upstream 28321 8567615 ~ 8567913 (+) True G155848
TU176952 lncRNA upstream 28787 8566307 ~ 8567447 (+) False G155845
TU176975 lncRNA downstream 5108 8602812 ~ 8603042 (+) True G155866
TU176976 lncRNA downstream 7128 8604832 ~ 8605058 (+) True G155867
TU176977 lncRNA downstream 7553 8605257 ~ 8702576 (+) True G155868
TU176961 lncRNA downstream 75275 8672979 ~ 8673500 (+) True G155852
TU177040 lncRNA downstream 119850 8717554 ~ 8717870 (+) True G155930
CI01000029_08578097_08583564.mRNA mRNA upstream 12261 8577815 ~ 8583973 (+) True CI01000029_08578097_08583564
CI01000029_08558693_08564749.mRNA mRNA upstream 31238 8558263 ~ 8564996 (+) True CI01000029_08558693_08564749
CI01000029_08533907_08555317.mRNA mRNA upstream 40265 8533907 ~ 8555969 (+) True CI01000029_08533907_08555317
CI01000029_08506379_08516187.mRNA mRNA upstream 79929 8506379 ~ 8516305 (+) True CI01000029_08506379_08516187
CI01000029_08484998_08502958.mRNA mRNA upstream 93065 8484952 ~ 8503169 (+) True CI01000029_08484998_08502958
CI01000029_08654610_08655443.mRNA mRNA downstream 54878 8652582 ~ 8656550 (+) True CI01000029_08654610_08655443
CI01000029_08743604_08749941.mRNA mRNA downstream 143030 8740734 ~ 8750337 (+) True CI01000029_08743604_08749941
CI01000029_08759743_08761002.mRNA mRNA downstream 162039 8759743 ~ 8761194 (+) False CI01000029_08759743_08761002
CI01000029_08915550_08920146.mRNA mRNA downstream 316719 8914423 ~ 8920358 (+) True CI01000029_08915550_08920146
CI01000029_08990637_09003719.mRNA mRNA downstream 392853 8990557 ~ 9003779 (+) True CI01000029_08990637_09003719
TU176707 other upstream 664057 7931480 ~ 7932177 (+) True G155627
TU176602 other upstream 958400 7634833 ~ 7637834 (+) True G155522
TU176307 other upstream 1688802 6906188 ~ 6907432 (+) False CI01000029_06906861_06907157
TU176095 other upstream 2105940 6431535 ~ 6490294 (+) False G155083
TU177125 other downstream 367114 8964818 ~ 9064541 (+) False G156007

Expression Profile