RNA id: TU225919



Basic Information


Item Value
RNA id TU225919
length 316
RNA type TUCP
GC content 0.49
exon number 1
gene id G199054
representative True

Chromosome Information


Item Value
chromosome id CI01000046
NCBI id null
chromosome length 7063170
location 6097359 ~ 6097674 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


CGGGAACACTTCCTATAACACCTGATGTACTCGTTACATCAGAAGAAGAATGGCATCTACGCTAATATTAGTCTTTCTGTTTATCCCGAGGTTCACCGTAGTCAACTGGATCCGGGCCGTATCCAGGTGAGACCAAGGACCTGCGCCTTGACACGACCACAACGCAGCCCTGACGTATCAGCAGAGATTGAGTCAACTAGATCATCCACTGTGAGGGCCTCATCGACACGACAGCCACGACACAGTTCCTCAACAACCGTCCATACCGGCGTGATCCTCAATACGATCCTCAATTGGATGGAACTGAAATAAATAC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU225918 lncRNA downstream 34172 6062680 ~ 6063187 (-) True G199053
TU225904 lncRNA downstream 40823 6017109 ~ 6017730 (-) True G199040
TU225843 lncRNA downstream 103223 5993828 ~ 5994136 (-) True G198992
TU225790 lncRNA downstream 109961 5984940 ~ 5987398 (-) True G198939
TU225785 lncRNA downstream 229454 5864689 ~ 5867905 (-) True G198935
TU225925 lncRNA upstream 6411 6104085 ~ 6104349 (-) True G199060
TU225932 lncRNA upstream 26680 6124354 ~ 6124643 (-) True G199067
TU225933 lncRNA upstream 27778 6125452 ~ 6125856 (-) True G199068
TU225934 lncRNA upstream 29963 6127637 ~ 6128084 (-) True G199069
TU225935 lncRNA upstream 30441 6128115 ~ 6128549 (-) True G199070
CI01000046_06054062_06061413.mRNA mRNA downstream 35804 6053994 ~ 6061555 (-) False CI01000046_06054062_06061413
CI01000046_05874697_05877228.mRNA mRNA downstream 217782 5874559 ~ 5879577 (-) True CI01000046_05874697_05877228
CI01000046_05746299_05753388.mRNA mRNA downstream 343971 5746299 ~ 5753388 (-) True CI01000046_05746299_05753388
CI01000046_05718149_05727984.mRNA mRNA downstream 369375 5718129 ~ 5727984 (-) True CI01000046_05718149_05727984
CI01000046_05655039_05668170.mRNA mRNA downstream 428869 5655039 ~ 5668490 (-) True CI01000046_05655039_05668170
CI01000046_06165650_06167393.mRNA mRNA upstream 67964 6165638 ~ 6167708 (-) True CI01000046_06165650_06167393
CI01000046_06171463_06172702.mRNA mRNA upstream 73332 6171006 ~ 6174632 (-) True CI01000046_06171463_06172702
CI01000046_06192265_06195160.mRNA mRNA upstream 93499 6191173 ~ 6195626 (-) False CI01000046_06192265_06195160
CI01000046_06223230_06251304.mRNA mRNA upstream 125105 6222779 ~ 6251304 (-) True CI01000046_06223230_06251304
CI01000046_06312028_06323678.mRNA mRNA upstream 214263 6311937 ~ 6323850 (-) False CI01000046_06312028_06323678
TU225032 other downstream 2297258 3757623 ~ 3800101 (-) False G198265
TU224633 other downstream 3229565 2866259 ~ 2867794 (-) True CI01000046_02866255_02867695
TU223112 other downstream 3928715 2168266 ~ 2168644 (-) True G196463
TU221589 other downstream 5317066 777733 ~ 780293 (-) True CI01000046_00777923_00780186
TU221617 other downstream 5421231 670736 ~ 676128 (-) True G195098
TU225878 other upstream 266504 6364178 ~ 6375406 (-) True G199014
TU226000 other upstream 480306 6577980 ~ 6592925 (-) False G199130
TU226079 other upstream 729011 6826685 ~ 6830453 (-) True G199181

Expression Profile