RNA id: TU251268


Basic Information

Item Value
RNA id TU251268
length 276
lncRNA type inter_gene
GC content 0.51
exon number 1
gene id G221530
representative True

Chromosome Information

Item Value
chromosome id CI01000051
NCBI id null
chromosome length 8436717
location 7996022 ~ 7996297 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

CAAGAAGTTAATGATGGTTCTGATAGAAAGGTGTCAGAATACACAGTGCATCGCAGTTTGTTGCGTATGGAGCAGACCAGTCAGGGTGTCCCTGCTGACCCCTGTCCACTGCCGAAAGCACCAACAAGTGGGCACGTGAGCATCAGAACTGGACCATGGAGCAATGGAAGAAGGTGGCCTGGTCTGATGAATCACGTTTTCTTTTACATCACGTGGATGGCCGGGTGCGTGTGTGTTGCTTACCTGGGGAACACATGGCACCAGGATGCACTATAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU251035 lncRNA upstream 128994 7866916 ~ 7867028 (+) True G221315
TU251053 lncRNA upstream 155248 7804351 ~ 7840774 (+) True G221333
TU251136 lncRNA upstream 540485 7455331 ~ 7455537 (+) True G221409
TU251135 lncRNA upstream 544011 7451740 ~ 7452011 (+) True G221408
TU251128 lncRNA upstream 545132 7450479 ~ 7450890 (+) False G221406
TU251276 lncRNA downstream 12618 8008915 ~ 8009351 (+) True G221538
TU251277 lncRNA downstream 19947 8016244 ~ 8016535 (+) True G221539
TU251290 lncRNA downstream 45320 8041617 ~ 8041854 (+) True G221552
TU252505 lncRNA downstream 227653 8223950 ~ 8224280 (+) True G222631
TU252516 lncRNA downstream 236369 8232666 ~ 8232884 (+) True G222642
CI01000051_07978982_07979269.mRNA mRNA upstream 16719 7978390 ~ 7979303 (+) True CI01000051_07978982_07979269
CI01000051_07963621_07976671.mRNA mRNA upstream 17813 7963621 ~ 7978209 (+) True CI01000051_07963621_07976671
CI01000051_07954270_07957397.mRNA mRNA upstream 38463 7954270 ~ 7957559 (+) True CI01000051_07954270_07957397
CI01000051_07946087_07950464.mRNA mRNA upstream 44541 7946016 ~ 7951481 (+) True CI01000051_07946087_07950464
CI01000051_07938052_07941645.mRNA mRNA upstream 53911 7937692 ~ 7942111 (+) True CI01000051_07938052_07941645
CI01000051_08046197_08069874.mRNA mRNA downstream 49598 8045895 ~ 8069917 (+) True CI01000051_08046197_08069874
CI01000051_08171018_08172280.mRNA mRNA downstream 174721 8171018 ~ 8172544 (+) True CI01000051_08171018_08172280
CI01000051_08211233_08214513.mRNA mRNA downstream 213425 8209722 ~ 8214696 (+) False CI01000051_08211233_08214513
CI01000051_08381644_08388611.mRNA mRNA downstream 385294 8381591 ~ 8389116 (+) True CI01000051_08381644_08388611
CI01000051_08425890_08429863.mRNA mRNA downstream 428400 8424697 ~ 8429965 (+) True CI01000051_08425890_08429863
TU251108 other upstream 583015 7409523 ~ 7413007 (+) True G221386
TU251039 other upstream 653476 7342041 ~ 7342546 (+) True G221319
TU250885 other upstream 1162954 6825799 ~ 6833068 (+) True G221187
TU249310 other upstream 2943989 5018305 ~ 5052033 (+) False G219803
TU251044 other downstream 109346 8105643 ~ 8128075 (+) True G221324
TU252626 other downstream 346645 8342942 ~ 8343448 (+) True G222727

Expression Profile