Gene
RNA
| Item | Value |
|---|---|
| RNA id | CI01000055_05183333_05195895.mRNA |
| length | 2088 |
| RNA type | mRNA |
| GC content | 0.48 |
| exon number | 8 |
| gene id | CI01000055_05183333_05195895 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CI01000055 |
| NCBI id | null |
| chromosome length | 6774723 |
| location | 5183333 ~ 5196570 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| species | grasscarp (Ctenopharyngodon idella) |
| id | name | namespace |
|---|---|---|
| GO:0005737 | cytoplasm | cellular_component |
| id | description |
|---|---|
| K10482 | BTBD10; BTB/POZ domain-containing protein 10 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU272474 | lncRNA | upstream | 7150 | 5173702 ~ 5174581 (+) | True | G240141 |
| TU272476 | lncRNA | upstream | 14004 | 5168979 ~ 5169329 (+) | True | G240143 |
| TU272398 | lncRNA | upstream | 24318 | 5158732 ~ 5159015 (+) | True | G240071 |
| TU272395 | lncRNA | upstream | 25056 | 5157917 ~ 5158277 (+) | True | G240068 |
| TU272449 | lncRNA | upstream | 100587 | 5082532 ~ 5082746 (+) | True | G240116 |
| TU272487 | lncRNA | downstream | 36244 | 5232814 ~ 5233313 (+) | True | G240154 |
| TU272505 | lncRNA | downstream | 50064 | 5246634 ~ 5251328 (+) | True | G240163 |
| TU272516 | lncRNA | downstream | 120716 | 5317286 ~ 5317495 (+) | True | G240171 |
| TU272521 | lncRNA | downstream | 129883 | 5326453 ~ 5327130 (+) | True | G240176 |
| TU272522 | lncRNA | downstream | 130814 | 5327384 ~ 5327704 (+) | True | G240177 |
| CI01000055_05176060_05176484.mRNA | mRNA | upstream | 6700 | 5175827 ~ 5176633 (+) | False | CI01000055_05176060_05176484 |
| CI01000055_05163240_05166231.mRNA | mRNA | upstream | 16705 | 5162990 ~ 5166628 (+) | False | CI01000055_05163240_05166231 |
| CI01000055_05121603_05155153.mRNA | mRNA | upstream | 28180 | 5121603 ~ 5155153 (+) | True | CI01000055_05121603_05155153 |
| CI01000055_05086576_05086973.mRNA | mRNA | upstream | 95952 | 5086026 ~ 5087381 (+) | True | CI01000055_05086576_05086973 |
| CI01000055_05047161_05054848.mRNA | mRNA | upstream | 127884 | 5046231 ~ 5055449 (+) | False | CI01000055_05047161_05054848 |
| CI01000055_05212820_05215358.mRNA | mRNA | downstream | 14901 | 5211471 ~ 5216143 (+) | True | CI01000055_05212820_05215358 |
| CI01000055_05216403_05221104.mRNA | mRNA | downstream | 19630 | 5216200 ~ 5221170 (+) | True | CI01000055_05216403_05221104 |
| CI01000055_05263543_05300250.mRNA | mRNA | downstream | 66677 | 5263247 ~ 5300649 (+) | True | CI01000055_05263543_05300250 |
| CI01000055_05517350_05524400.mRNA | mRNA | downstream | 320780 | 5517350 ~ 5524620 (+) | True | CI01000055_05517350_05524400 |
| CI01000055_05565166_05572215.mRNA | mRNA | downstream | 368596 | 5565166 ~ 5572457 (+) | True | CI01000055_05565166_05572215 |
| TU272472 | other | upstream | 16686 | 5165492 ~ 5166647 (+) | True | CI01000055_05163240_05166231 |
| TU272088 | other | upstream | 910618 | 4264027 ~ 4264066 (+) | True | G239802 |
| TU272029 | other | upstream | 928241 | 4254210 ~ 4255092 (+) | True | G239755 |
| TU272036 | other | upstream | 969931 | 4162250 ~ 4213402 (+) | True | G239761 |
| TU271351 | other | upstream | 2639215 | 2541201 ~ 2541235 (+) | True | G239173 |
| TU272428 | other | downstream | 339948 | 5536518 ~ 5543812 (+) | True | G240099 |
| TU272585 | other | downstream | 417808 | 5614378 ~ 5616353 (+) | False | CI01000055_05614889_05616453 |
| TU272586 | other | downstream | 418062 | 5614632 ~ 5617591 (+) | True | CI01000055_05614889_05616453 |
| TU272705 | other | downstream | 890255 | 6086825 ~ 6086887 (+) | True | G240319 |
| TU272730 | other | downstream | 967290 | 6163860 ~ 6164011 (+) | True | G240344 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| zebrafish (Danio rerio) | TCONS_00047664 | False | 2634 | lncRNA | 0.47 | 10 | NC_007136.7 | 17862338 ~ 17892830 (+) |
