RNA id: CI01000057_01707526_01708449.mRNA


Basic Information

Item Value
RNA id CI01000057_01707526_01708449.mRNA
length 254
RNA type mRNA
GC content 0.42
exon number 2
gene id CI01000057_01707526_01708449
representative True

Chromosome Information

Item Value
chromosome id CI01000057
NCBI id null
chromosome length 6014843
location 1707495 ~ 1708449 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

GAGTGGGCGATATCTGCCGGCACTGCGTTTCTATCGGCATTCCATAGTCCAGTGTCCAAGAGACAGATTCACCCAGGTCATTTCAGAAAAATCAGACACCTTTCTTCTCAGACAAGAGCCAGCTATTAAGACGAGGGACTTTCTTCAGGTACGCACACGTGCAAATGAAAAGAAGTCCAAATACAAGAATGCCGTCGAAAGAGTACACTGTGAATACAGATAACATAATTAACAAGAGTAAATAAGTAAATAAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU277775 lncRNA downstream 5615 1582943 ~ 1701880 (-) False G244676
TU277776 lncRNA downstream 5615 1582943 ~ 1701880 (-) False G244676
TU277777 lncRNA downstream 5615 1582943 ~ 1701880 (-) False G244676
TU277765 lncRNA downstream 5615 1650491 ~ 1701880 (-) False G244676
TU277771 lncRNA downstream 5615 1650491 ~ 1701880 (-) False G244676
TU277796 lncRNA upstream 73299 1781748 ~ 1785550 (-) True G244693
TU277917 lncRNA upstream 109808 1818257 ~ 1818595 (-) True G244805
TU277918 lncRNA upstream 111194 1819643 ~ 1819987 (-) True G244806
TU277919 lncRNA upstream 112462 1820911 ~ 1821170 (-) True G244807
TU277921 lncRNA upstream 116835 1825284 ~ 1826279 (-) True G244809
CI01000057_01559593_01572133.mRNA mRNA downstream 134645 1559547 ~ 1572850 (-) True CI01000057_01559593_01572133
CI01000057_01542990_01546030.mRNA mRNA downstream 161465 1542797 ~ 1546030 (-) True CI01000057_01542990_01546030
CI01000057_01471460_01487413.mRNA mRNA downstream 219733 1471127 ~ 1487762 (-) True CI01000057_01471460_01487413
CI01000057_01356170_01359401.mRNA mRNA downstream 347525 1355409 ~ 1359970 (-) False CI01000057_01356170_01359401
CI01000057_01261251_01262315.mRNA mRNA downstream 445180 1260686 ~ 1262315 (-) True CI01000057_01261251_01262315
CI01000057_01801708_01806454.mRNA mRNA upstream 93079 1801528 ~ 1806454 (-) False CI01000057_01801708_01806454
CI01000057_01904867_01921400.mRNA mRNA upstream 196084 1904533 ~ 1921905 (-) False CI01000057_01904867_01921400
CI01000057_02200951_02207673.mRNA mRNA upstream 492131 2200580 ~ 2207673 (-) True CI01000057_02200951_02207673
CI01000057_02248495_02254279.mRNA mRNA upstream 539897 2248346 ~ 2254318 (-) True CI01000057_02248495_02254279
CI01000057_02258394_02291730.mRNA mRNA upstream 549945 2258394 ~ 2291730 (-) True CI01000057_02258394_02291730
TU277370 other downstream 1136467 570530 ~ 571028 (-) True G244358
TU277369 other downstream 1136581 570530 ~ 570914 (-) False G244358
TU277905 other upstream 93135 1805098 ~ 1805153 (-) True G244797
TU277965 other upstream 211607 1920056 ~ 1921421 (-) True CI01000057_01904867_01921400
TU279491 other upstream 2183286 3895949 ~ 3897691 (-) True G246256
TU279998 other upstream 3220295 4928744 ~ 4931143 (-) False CI01000057_04927533_04931127
TU279999 other upstream 3220295 4928744 ~ 4931420 (-) True CI01000057_04927533_04931127

Expression Profile