Gene
RNA
| Item | Value |
|---|---|
| RNA id | CI01000071_04834539_04839129.mRNA |
| length | 1660 |
| RNA type | mRNA |
| GC content | 0.47 |
| exon number | 9 |
| gene id | CI01000071_04834539_04839129 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CI01000071 |
| NCBI id | null |
| chromosome length | 5214881 |
| location | 4834326 ~ 4839355 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| species | grasscarp (Ctenopharyngodon idella) |
| id | name | namespace |
|---|---|---|
| GO:0016567 | protein ubiquitination | biological_process |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU321220 | lncRNA | upstream | 10538 | 4822773 ~ 4823788 (+) | True | G283442 |
| TU321218 | lncRNA | upstream | 16097 | 4817956 ~ 4818229 (+) | True | G283440 |
| TU321192 | lncRNA | upstream | 85984 | 4747579 ~ 4748342 (+) | False | CI01000071_04737911_04747060 |
| TU321193 | lncRNA | upstream | 86376 | 4747579 ~ 4747950 (+) | True | CI01000071_04737911_04747060 |
| TU321172 | lncRNA | upstream | 115404 | 4715415 ~ 4718922 (+) | True | G283401 |
| TU321199 | lncRNA | downstream | 67266 | 4906621 ~ 4906962 (+) | True | G283421 |
| TU321201 | lncRNA | downstream | 123583 | 4962938 ~ 4965441 (+) | True | G283423 |
| TU321200 | lncRNA | downstream | 129713 | 4969068 ~ 4970189 (+) | True | G283422 |
| TU321238 | lncRNA | downstream | 143240 | 4982595 ~ 4989704 (+) | True | G283457 |
| TU321358 | lncRNA | downstream | 225277 | 5064632 ~ 5064913 (+) | True | G283557 |
| CI01000071_04825708_04831021.mRNA | mRNA | upstream | 3259 | 4825708 ~ 4831067 (+) | True | CI01000071_04825708_04831021 |
| CI01000071_04780189_04798898.mRNA | mRNA | upstream | 35428 | 4780189 ~ 4798898 (+) | True | CI01000071_04780189_04798898 |
| CI01000071_04751375_04752037.mRNA | mRNA | upstream | 81884 | 4751169 ~ 4752442 (+) | True | CI01000071_04751375_04752037 |
| CI01000071_04737911_04747060.mRNA | mRNA | upstream | 86442 | 4737421 ~ 4747884 (+) | False | CI01000071_04737911_04747060 |
| CI01000071_04706607_04712020.mRNA | mRNA | upstream | 122103 | 4706607 ~ 4712223 (+) | True | CI01000071_04706607_04712020 |
| CI01000071_04851502_04865548.mRNA | mRNA | downstream | 12147 | 4851502 ~ 4865548 (+) | True | CI01000071_04851502_04865548 |
| CI01000071_04903716_04959830.mRNA | mRNA | downstream | 64361 | 4903716 ~ 4959861 (+) | False | CI01000071_04903716_04959830 |
| CI01000071_04982029_04982493.mRNA | mRNA | downstream | 142001 | 4981356 ~ 4982540 (+) | True | CI01000071_04982029_04982493 |
| CI01000071_05002535_05056745.mRNA | mRNA | downstream | 162834 | 5002189 ~ 5057408 (+) | True | CI01000071_05002535_05056745 |
| CI01000071_05081168_05081463.mRNA | mRNA | downstream | 241813 | 5081168 ~ 5082153 (+) | True | CI01000071_05081168_05081463 |
| TU319744 | other | upstream | 1777795 | 3056084 ~ 3056531 (+) | True | G282080 |
| TU319630 | other | upstream | 2005722 | 2804644 ~ 2804806 (+) | True | G281974 |
| TU318234 | other | upstream | 3456656 | 1375724 ~ 1375792 (+) | True | G280680 |
| TU317961 | other | upstream | 3912230 | 905217 ~ 922096 (+) | True | G280443 |
| TU318001 | other | upstream | 4031009 | 799775 ~ 799876 (+) | True | G280464 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| zebrafish (Danio rerio) | TCONS_00060047 | True | 1523 | mRNA | 0.49 | 9 | NC_007116.7 | 12549551 ~ 12560569 (-) |
