RNA id: TU324482


Basic Information

Item Value
RNA id TU324482
length 216
lncRNA type inter_gene
GC content 0.37
exon number 1
gene id G286290
representative True

Chromosome Information

Item Value
chromosome id CI01000072
NCBI id null
chromosome length 5473029
location 3391163 ~ 3391378 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

AGCAAATCCACGTGATCAACTTGAACCCGTTGCATGGGCAATTCTTTTGTGCAAAATTCCCAATCGTGTGTGTGGATTCCTACTGAAATGATAAAAATTTTGCTAAACAACAGTAAATGTGATCGCACCTTTACTCAGAGGTCCAACCTAAGCAGCTTTATATTGATCAACACAGTGAATTTGTGTGTTTAAAAGTTTAACAAACTTAAATCCAGG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU324481 lncRNA downstream 13 3390707 ~ 3391150 (-) True G286289
TU324477 lncRNA downstream 7128 3383823 ~ 3384035 (-) True G286285
TU324476 lncRNA downstream 21955 3368368 ~ 3369208 (-) True G286284
TU324473 lncRNA downstream 33377 3357489 ~ 3357786 (-) True G286281
TU324472 lncRNA downstream 33719 3356427 ~ 3357444 (-) True G286280
TU324438 lncRNA upstream 2385 3393763 ~ 3473051 (-) True G286249
TU324406 lncRNA upstream 19284 3410662 ~ 3436199 (-) True G286219
TU324425 lncRNA upstream 109723 3501101 ~ 3502215 (-) True G286236
TU324445 lncRNA upstream 450292 3841670 ~ 3842062 (-) True G286256
TU324371 lncRNA upstream 578750 3970128 ~ 3976002 (-) True G286205
CI01000072_03379532_03381460.mRNA mRNA downstream 8621 3379323 ~ 3382542 (-) True CI01000072_03379532_03381460
CI01000072_03330998_03335358.mRNA mRNA downstream 55805 3330817 ~ 3335358 (-) True CI01000072_03330998_03335358
CI01000072_03270542_03289988.mRNA mRNA downstream 100973 3270479 ~ 3290190 (-) True CI01000072_03270542_03289988
CI01000072_03210624_03244667.mRNA mRNA downstream 146496 3210219 ~ 3244667 (-) True CI01000072_03210624_03244667
CI01000072_03189624_03195527.mRNA mRNA downstream 195636 3189551 ~ 3195527 (-) True CI01000072_03189624_03195527
CI01000072_03396929_03398233.mRNA mRNA upstream 5269 3396647 ~ 3399019 (-) True CI01000072_03396929_03398233
CI01000072_03455112_03462887.mRNA mRNA upstream 63293 3454671 ~ 3462887 (-) True CI01000072_03455112_03462887
CI01000072_03497623_03625293.mRNA mRNA upstream 106245 3497623 ~ 3625293 (-) True CI01000072_03497623_03625293
CI01000072_03788767_03792874.mRNA mRNA upstream 396792 3788170 ~ 3793728 (-) True CI01000072_03788767_03792874
CI01000072_03844170_03870555.mRNA mRNA upstream 452114 3843492 ~ 3870555 (-) True CI01000072_03844170_03870555
TU324139 other downstream 391668 2993769 ~ 2999495 (-) True G286005
TU323875 other downstream 1220505 2168048 ~ 2170658 (-) True G285752
TU323892 other downstream 1382854 2005551 ~ 2008309 (-) True G285766
TU323812 other downstream 1763268 1602289 ~ 1602443 (-) True G285697
TU324361 other upstream 578892 3970270 ~ 3976002 (-) False G286205
TU324366 other upstream 578892 3970270 ~ 3976067 (-) False G286205
TU324367 other upstream 578892 3970270 ~ 3976002 (-) False G286205
TU324368 other upstream 578892 3970270 ~ 3976002 (-) False G286205
TU325381 other upstream 994767 4386145 ~ 4394223 (-) True G287021

Expression Profile