RNA id: CI01000092_01352766_01386659.mRNA


Basic Information

Item Value
RNA id CI01000092_01352766_01386659.mRNA
length 2403
RNA type mRNA
GC content 0.49
exon number 18
gene id CI01000092_01352766_01386659
representative True

Chromosome Information

Item Value
chromosome id CI01000092
NCBI id null
chromosome length 5370156
location 1352745 ~ 1386659 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

GTGGGTTTCCGTAAGGGTGGTGTTCAGTTGTTTGGTCCACTGGGCAGGAGGACTCAGTTGGAGGTGGTTTTGGCCAGTCTGCTTCTCGCTTCACTTCTAGCACTGTTTGGCTGTGCGATCACACTGGGAGTCCGCTATAACAGAGATCCAGCACGTAGTATCTGTCTAACAGAGGCATGTGTAACCGTGGCCAGTAAGATCGTGGAAGCTGTGGATCGCTCCGTAGACCCATGTCAGGATTTTTACCAGTACGCCTGCGGAGGATGGGTCCGCAAAAACCCCCTGCCAGATGGCCGGTCCCGCTGGAGCACATTTAACAGCATCTGGGACCAGAACCAGGCTGTGCTCAAACACCTGCTGGAAAATGGCACCTTTAACTCAAGCAGTGAGGCAGAGAGAAAGACGCAGTCCTACTATCTTTCCTGTCTCAATGAACAACGAATAGAAGAGCTCGGAGCCCAACCACTCATCGACTTGATTGGAAAGCTGCCTTCTGGAAGGTTTAAAAGAGATACGGTTGGGAAGATGGAGGACGAAAAATTTACACTGCCTTTTGAACACACTTTTACAAATGCTACCCTTCTCTTCTATCTTTTTCTTAATCTGTCGCTCTTTCTGTCATCTCGTGTCATTGGGATCACAGTGATAGAGCATATAGTGTTGAAGATAGCTGAGAATAGTTTTATTCTCAGAGGAGGCTGGAACATCACAGAGTCCTGGGATAAAGATAACTTTCTGGACGTTTTAAAGATAGTTTCTGGGCCTTACAGAGCTCAGCCCTTCTTCACTGTTGGTGTCAGTGTGGACCCTAAAAACTCCAACAGCAATGTCATTCAGGTTGACCAATCAGGACTCTTCCTCCCATCCAGAGATTATTACCTCAATAAGACAAATGAGAAGGTGTTGAAGGCTTACCTGGATTACATGGTAGAGTTGGGATTGTTGTTGGGAGGAGACAAGAATTCCACCCGAAGTCAGATGCAGCAAATTTTGGACTTCGAGACAGCACTGGCTAACATTACAGTGCCTCAGGACGAACGGCGAGACGAGGAAAAGATCTACCACAAGATAACGATAGCTGAACTCCAGGCGTTGGCTCCAGCAGTTGAATGGTTGGATTATCTGAACTCCGTCCTTTTACCGCTAGAGTTGAACGACACAGAGCCTGTGGTGGTCTACGCCAAAGAATACATGCAACAAGTTTCGGACCTTATCAACAAGACCGACCGCAGTCTTCTGAATAATTACATGATCTGGAATCTGGTGCAGAAAGGAGCGTCCAGTCTTGACCAGCGGTTTGAGAATGCTCAGGATAAGCTCCTGGAGAGCCTCTATGGCACGAAGAAGGCAGAGGGAATGATCAATGAAATCCGCACAGCTTTCAAAAGCGCGCTAGATGATTTGAACTGGATGGATGAACAGACCCGACAAGCTGCCAAGGACAAGGCGGATGCCATCTATGACATGATTGGATTTCCAGACTTCATTCTGGACTCCAAAGAGCTTGATGATGTGTATGATGGGTATGAGGTTACAGAAGACAACTTCTTCCAGAATATGATCAACTTCTATAACTTCTCAGCACGAGTGATGGCAGACCAGCTCCGCAAGCCACCAAACCGAGACCAATGGAGCATGACTCCACCCACGGTGAACGCTTACTACATGCCAACCAAGAATGGGATCGTCTTCCCCGCTGGCATCTTACAGGCCCCGTTCTACGCCCAAGATCACCCCAAAGCTTTAAACTTTGGTGGTATTGGAGTGGTTATGGGACACGAGTTAACGCATGCATTTGATGACCAAGGCAGAGAGTATGACAAAGATGGAAACCTTCGACCGTGGTGGCAGAACTCCTCTGTGGACGCGTTTAAGAACCGCACTGAGTGTATGGTGGATCAGTACACGCAGTACACCATCAATGGAGAGCACATTAATGGAAAACAGACGCTGGGAGAAAACATAGCAGACAATGGTGGTCTGAAAGCTGCCTATCACGCGTATAGGTCATGGGTGAGGAAGAACGGTGAAGAGAAGAGACTCCCAGCTGTCAATCTGACAAACGACCAGCTCTTCTTCGTAGGTTTTGCACAGGTCTGGTGCTCTGTCCGAACACCAGAAAGTGCTCACGAGGGCCTGATGACGGACCCTCACAGCCCACCCAAATACCGTGTCATCGGCACCCTGTCCAACTCGCCCGACTTCGCAGAGCACTTCCAGTGTCCGCTGGGCTCTCCCATGAACTCAGGCCACCGCTGTGAGGAAATGTTTGGCTCCATCTGTGATGACTTCACAGGAAGATTCACTGAAGATTCACAGGAAGTGCTGAACGACATCCGTGACCCCCCACAGGAAGGAAGAAAGCCTATTTCCCAATTGTGATTTCATAGAAATGCTATTAAA

Function

GO:

id name namespace
GO:0016787 hydrolase activity molecular_function

KEGG:

id description
K01415 ECE; endothelin-converting enzyme

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU345946 lncRNA downstream 5857 1346329 ~ 1346888 (-) True G304455
TU345975 lncRNA downstream 7132 1345293 ~ 1345613 (-) True G304484
TU345972 lncRNA downstream 62968 1289439 ~ 1289777 (-) True G304481
TU345968 lncRNA downstream 66190 1286228 ~ 1286555 (-) True G304477
TU345960 lncRNA downstream 80385 1272143 ~ 1272360 (-) True G304469
TU345978 lncRNA upstream 36930 1423589 ~ 1423791 (-) True G304487
TU345948 lncRNA upstream 85349 1472008 ~ 1481912 (-) True G304457
TU346007 lncRNA upstream 161579 1548238 ~ 1548482 (-) True G304512
TU346013 lncRNA upstream 168739 1555398 ~ 1555698 (-) True G304518
TU346015 lncRNA upstream 224421 1611080 ~ 1611355 (-) True G304520
CI01000092_01317932_01336911.mRNA mRNA downstream 14199 1317774 ~ 1338546 (-) True CI01000092_01317932_01336911
CI01000092_01307631_01315805.mRNA mRNA downstream 36940 1307315 ~ 1315805 (-) True CI01000092_01307631_01315805
CI01000092_01270604_01273133.mRNA mRNA downstream 79612 1269745 ~ 1273133 (-) True CI01000092_01270604_01273133
CI01000092_01266540_01267541.mRNA mRNA downstream 84266 1266358 ~ 1268479 (-) True CI01000092_01266540_01267541
CI01000092_01201434_01205306.mRNA mRNA downstream 146213 1199874 ~ 1206532 (-) True CI01000092_01201434_01205306
CI01000092_01451469_01485752.mRNA mRNA upstream 64810 1451469 ~ 1485752 (-) True CI01000092_01451469_01485752
CI01000092_01488880_01522758.mRNA mRNA upstream 102221 1488880 ~ 1522758 (-) True CI01000092_01488880_01522758
CI01000092_01562366_01575276.mRNA mRNA upstream 175389 1562048 ~ 1575276 (-) True CI01000092_01562366_01575276
CI01000092_01588502_01599337.mRNA mRNA upstream 201814 1588473 ~ 1599337 (-) True CI01000092_01588502_01599337
CI01000092_01802304_01802591.mRNA mRNA upstream 414136 1800795 ~ 1804239 (-) True CI01000092_01802304_01802591
TU345950 other downstream 120453 1231900 ~ 1232292 (-) True G304459
TU345834 other downstream 255827 1086662 ~ 1096918 (-) True CI01000092_01086701_01097333
TU345840 other downstream 293825 1058367 ~ 1058920 (-) False G304369
TU345843 other downstream 293881 1058325 ~ 1058864 (-) False G304369
TU347441 other upstream 1337935 2724594 ~ 2724944 (-) True G305772
TU347691 other upstream 2291215 3677874 ~ 3679488 (-) True G306014
TU348466 other upstream 3109755 4496414 ~ 4505953 (-) True G306679
TU348596 other upstream 3417736 4804395 ~ 4865973 (-) True G306792
TU348717 other upstream 3767009 5153668 ~ 5154133 (-) True G306902

Expression Profile