RNA id: TU346435



Basic Information


Item Value
RNA id TU346435
length 200
lncRNA type inter_gene
GC content 0.42
exon number 1
gene id G304902
representative True

Chromosome Information


Item Value
chromosome id CI01000092
NCBI id null
chromosome length 5370156
location 2244431 ~ 2244630 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


GTTGAAAGAGCTGGGAGAATTAGGAAGTAAGCATTTGTTATCCCTGGATGGAGCTCTGGACAGAGTTAGTCCAGGAAGATTTGACTGTAAGGGTACTGTTTAAACGCACAGCTACCTGACAAATATAAATATTTTTACAGTTATCCCTCCGCATGAAGAAGATCCGTTTAGATCCGCTCTGATGGACAACAAAGTTGAGT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU346433 lncRNA downstream 3258 2240405 ~ 2241173 (-) True G304900
TU346431 lncRNA downstream 5236 2238737 ~ 2239195 (-) True G304898
TU346428 lncRNA downstream 11482 2232519 ~ 2232949 (-) True G304895
TU346379 lncRNA downstream 83417 2125390 ~ 2161014 (-) True G304853
TU346315 lncRNA downstream 195099 2049125 ~ 2049332 (-) True G304795
TU346441 lncRNA upstream 14755 2259385 ~ 2259718 (-) True G304908
TU346448 lncRNA upstream 23436 2268066 ~ 2268278 (-) True G304915
TU346531 lncRNA upstream 29975 2274605 ~ 2275030 (-) True G304993
TU346540 lncRNA upstream 45854 2290484 ~ 2291063 (-) True G305002
TU346544 lncRNA upstream 52087 2296717 ~ 2296939 (-) True G305006
CI01000092_02191463_02196322.mRNA mRNA downstream 47861 2191156 ~ 2196570 (-) True CI01000092_02191463_02196322
CI01000092_02134927_02166170.mRNA mRNA downstream 77884 2133818 ~ 2166547 (-) True CI01000092_02134927_02166170
CI01000092_02072036_02082309.mRNA mRNA downstream 160651 2071728 ~ 2083780 (-) True CI01000092_02072036_02082309
CI01000092_02055330_02056247.mRNA mRNA downstream 188145 2055017 ~ 2056286 (-) True CI01000092_02055330_02056247
CI01000092_02043716_02044633.mRNA mRNA downstream 199759 2043391 ~ 2044672 (-) True CI01000092_02043716_02044633
CI01000092_02408861_02410832.mRNA mRNA upstream 163951 2408581 ~ 2411486 (-) True CI01000092_02408861_02410832
CI01000092_02423345_02438711.mRNA mRNA upstream 178359 2422989 ~ 2438720 (-) True CI01000092_02423345_02438711
CI01000092_02463561_02465847.mRNA mRNA upstream 218493 2463123 ~ 2466249 (-) True CI01000092_02463561_02465847
CI01000092_02522204_02531634.mRNA mRNA upstream 277493 2522123 ~ 2531634 (-) True CI01000092_02522204_02531634
CI01000092_02570666_02599836.mRNA mRNA upstream 325566 2570196 ~ 2599836 (-) True CI01000092_02570666_02599836
TU345950 other downstream 1012139 1231900 ~ 1232292 (-) True G304459
TU345834 other downstream 1147513 1086662 ~ 1096918 (-) True CI01000092_01086701_01097333
TU345840 other downstream 1185511 1058367 ~ 1058920 (-) False G304369
TU345843 other downstream 1185567 1058325 ~ 1058864 (-) False G304369
TU347441 other upstream 479964 2724594 ~ 2724944 (-) True G305772
TU347691 other upstream 1433244 3677874 ~ 3679488 (-) True G306014
TU348466 other upstream 2251784 4496414 ~ 4505953 (-) True G306679
TU348596 other upstream 2559765 4804395 ~ 4865973 (-) True G306792
TU348717 other upstream 2909038 5153668 ~ 5154133 (-) True G306902

Expression Profile