RNA id: TU346531


Basic Information

Item Value
RNA id TU346531
length 209
lncRNA type inter_gene
GC content 0.44
exon number 2
gene id G304993
representative True

Chromosome Information

Item Value
chromosome id CI01000092
NCBI id null
chromosome length 5370156
location 2274605 ~ 2275030 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

TTGAGTTAAACTAGTTAACCTCACTGGATAGTTGGGTTCTAAGATTTGGCTCCCTTAGAGTTTAGACTGCCACTGGCTGACGCCCATGTCATTCTGAGGTCGCAGGTCCTGTTTGGACCTCCTTCAGAGCATGATGGCGTAAGTTTGTACCCCTCTTGCTTAAAGAGTAAAAAGTGTTTTTACTGAGTACACTGCTTGTTGGAATGTGT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU346448 lncRNA downstream 6327 2268066 ~ 2268278 (-) True G304915
TU346441 lncRNA downstream 14887 2259385 ~ 2259718 (-) True G304908
TU346435 lncRNA downstream 29975 2244431 ~ 2244630 (-) True G304902
TU346433 lncRNA downstream 33432 2240405 ~ 2241173 (-) True G304900
TU346431 lncRNA downstream 35410 2238737 ~ 2239195 (-) True G304898
TU346540 lncRNA upstream 15454 2290484 ~ 2291063 (-) True G305002
TU346544 lncRNA upstream 21687 2296717 ~ 2296939 (-) True G305006
TU346547 lncRNA upstream 24964 2299994 ~ 2300434 (-) True G305009
TU346555 lncRNA upstream 36336 2311366 ~ 2311680 (-) True G305017
TU346556 lncRNA upstream 36676 2311706 ~ 2311938 (-) True G305018
CI01000092_02191463_02196322.mRNA mRNA downstream 78035 2191156 ~ 2196570 (-) True CI01000092_02191463_02196322
CI01000092_02134927_02166170.mRNA mRNA downstream 108058 2133818 ~ 2166547 (-) True CI01000092_02134927_02166170
CI01000092_02072036_02082309.mRNA mRNA downstream 190825 2071728 ~ 2083780 (-) True CI01000092_02072036_02082309
CI01000092_02055330_02056247.mRNA mRNA downstream 218319 2055017 ~ 2056286 (-) True CI01000092_02055330_02056247
CI01000092_02043716_02044633.mRNA mRNA downstream 229933 2043391 ~ 2044672 (-) True CI01000092_02043716_02044633
CI01000092_02408861_02410832.mRNA mRNA upstream 133551 2408581 ~ 2411486 (-) True CI01000092_02408861_02410832
CI01000092_02423345_02438711.mRNA mRNA upstream 147959 2422989 ~ 2438720 (-) True CI01000092_02423345_02438711
CI01000092_02463561_02465847.mRNA mRNA upstream 188093 2463123 ~ 2466249 (-) True CI01000092_02463561_02465847
CI01000092_02522204_02531634.mRNA mRNA upstream 247093 2522123 ~ 2531634 (-) True CI01000092_02522204_02531634
CI01000092_02570666_02599836.mRNA mRNA upstream 295166 2570196 ~ 2599836 (-) True CI01000092_02570666_02599836
TU345950 other downstream 1042313 1231900 ~ 1232292 (-) True G304459
TU345834 other downstream 1177687 1086662 ~ 1096918 (-) True CI01000092_01086701_01097333
TU345840 other downstream 1215685 1058367 ~ 1058920 (-) False G304369
TU345843 other downstream 1215741 1058325 ~ 1058864 (-) False G304369
TU347441 other upstream 449564 2724594 ~ 2724944 (-) True G305772
TU347691 other upstream 1402844 3677874 ~ 3679488 (-) True G306014
TU348466 other upstream 2221384 4496414 ~ 4505953 (-) True G306679
TU348596 other upstream 2529365 4804395 ~ 4865973 (-) True G306792
TU348717 other upstream 2878638 5153668 ~ 5154133 (-) True G306902

Expression Profile