RNA id: TU346623



Basic Information


Item Value
RNA id TU346623
length 201
lncRNA type inter_gene
GC content 0.37
exon number 1
gene id G305069
representative True

Chromosome Information


Item Value
chromosome id CI01000092
NCBI id null
chromosome length 5370156
location 2478344 ~ 2478544 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


AGAAAATGTATCATTTTAAAGGAAAAATAAGTTGATTTTGAATTTCATGGCATCAACACATCTCAAAAAATTTGGGACAAGGCCATGTTTACCACTGTGTGGCATCCCCTCTTCTTTTTATAACAGTCTGCAAACGTCTGGGGACTGAGGAGACAAGTTGCTCAAGTTTAGGAATAGGAATGTTGTCCCATTCTTGTCTAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU346622 lncRNA downstream 407 2477644 ~ 2477937 (-) True G305068
TU346606 lncRNA downstream 29573 2448253 ~ 2448771 (-) True G305056
TU346605 lncRNA downstream 29688 2447937 ~ 2448656 (-) False G305056
TU346600 lncRNA downstream 37089 2441048 ~ 2441255 (-) True G305053
TU346585 lncRNA downstream 71370 2406740 ~ 2406974 (-) True G305040
TU347402 lncRNA upstream 1395 2479939 ~ 2480165 (-) True G305736
TU347403 lncRNA upstream 10711 2489255 ~ 2489612 (-) True G305737
TU347436 lncRNA upstream 239458 2718002 ~ 2718204 (-) True G305767
TU347437 lncRNA upstream 240331 2718875 ~ 2719151 (-) True G305768
TU347442 lncRNA upstream 248893 2727437 ~ 2727705 (-) True G305773
CI01000092_02463561_02465847.mRNA mRNA downstream 12095 2463123 ~ 2466249 (-) True CI01000092_02463561_02465847
CI01000092_02423345_02438711.mRNA mRNA downstream 39624 2422989 ~ 2438720 (-) True CI01000092_02423345_02438711
CI01000092_02408861_02410832.mRNA mRNA downstream 66858 2408581 ~ 2411486 (-) True CI01000092_02408861_02410832
CI01000092_02191463_02196322.mRNA mRNA downstream 281774 2191156 ~ 2196570 (-) True CI01000092_02191463_02196322
CI01000092_02134927_02166170.mRNA mRNA downstream 311797 2133818 ~ 2166547 (-) True CI01000092_02134927_02166170
CI01000092_02522204_02531634.mRNA mRNA upstream 43579 2522123 ~ 2531634 (-) True CI01000092_02522204_02531634
CI01000092_02570666_02599836.mRNA mRNA upstream 91652 2570196 ~ 2599836 (-) True CI01000092_02570666_02599836
CI01000092_02602158_02608405.mRNA mRNA upstream 123142 2601686 ~ 2608405 (-) True CI01000092_02602158_02608405
CI01000092_02616905_02658519.mRNA mRNA upstream 138274 2616818 ~ 2658874 (-) True CI01000092_02616905_02658519
CI01000092_02673622_02702051.mRNA mRNA upstream 194980 2673524 ~ 2702051 (-) True CI01000092_02673622_02702051
TU345950 other downstream 1246052 1231900 ~ 1232292 (-) True G304459
TU345834 other downstream 1381426 1086662 ~ 1096918 (-) True CI01000092_01086701_01097333
TU345840 other downstream 1419424 1058367 ~ 1058920 (-) False G304369
TU345843 other downstream 1419480 1058325 ~ 1058864 (-) False G304369
TU347441 other upstream 246050 2724594 ~ 2724944 (-) True G305772
TU347691 other upstream 1199330 3677874 ~ 3679488 (-) True G306014
TU348466 other upstream 2017870 4496414 ~ 4505953 (-) True G306679
TU348596 other upstream 2325851 4804395 ~ 4865973 (-) True G306792
TU348717 other upstream 2675124 5153668 ~ 5154133 (-) True G306902

Expression Profile