RNA id: TU372903


Basic Information

Item Value
RNA id TU372903
length 214
lncRNA type inter_gene
GC content 0.60
exon number 1
gene id G328090
representative True

Chromosome Information

Item Value
chromosome id CI01000112
NCBI id null
chromosome length 5247617
location 247300 ~ 247513 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

GGCAAATGGAGTTCCCGTAGCCCGAACCTCCCGGTTGATCCAGCTCCGGAACAGCTCGCAGTCTTCCTGCTGGGCTTGGATGAGGGCTTGGAAACGCTGTTCCTGGTCGTCCCTCATCCCCAGCAGTGCCTGATGGTGTTCTTGGTGAAGACCTGTGAGCGATTGGATGACCTCCGCAAATGGCAAACCTGGCGGGGACTGCATTACGGCGGCG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU372902 lncRNA downstream 1029 245940 ~ 246271 (-) True G328089
TU372900 lncRNA downstream 2195 242702 ~ 245105 (-) True G328087
TU372867 lncRNA downstream 10233 227453 ~ 237067 (-) True G328055
TU372878 lncRNA downstream 103694 132620 ~ 143606 (-) True G328066
TU372874 lncRNA downstream 109419 136627 ~ 137881 (-) True G328062
TU372913 lncRNA upstream 11394 258907 ~ 259128 (-) True G328099
TU372917 lncRNA upstream 23669 271182 ~ 275584 (-) True G328102
TU372930 lncRNA upstream 58242 305755 ~ 305966 (-) True G328113
TU372940 lncRNA upstream 75230 322743 ~ 323096 (-) True G328118
TU372948 lncRNA upstream 116986 364499 ~ 365524 (-) True G328126
CI01000112_00133946_00189136.mRNA mRNA downstream 58164 133946 ~ 189136 (-) True CI01000112_00133946_00189136
CI01000112_00296142_00298776.mRNA mRNA upstream 47645 295158 ~ 298848 (-) True CI01000112_00296142_00298776
CI01000112_00311207_00314623.mRNA mRNA upstream 62179 309692 ~ 314884 (-) True CI01000112_00311207_00314623
CI01000112_00696611_00697182.mRNA mRNA upstream 449043 696556 ~ 697428 (-) False CI01000112_00696611_00697182
CI01000112_00792970_00793455.mRNA mRNA upstream 544819 792332 ~ 793455 (-) False CI01000112_00792970_00793455
CI01000112_00810157_00821637.mRNA mRNA upstream 561948 809461 ~ 821932 (-) False CI01000112_00810157_00821637
TU373185 other upstream 532651 780164 ~ 781784 (-) False G328332
TU373187 other upstream 532651 780164 ~ 781784 (-) True G328332
TU373157 other upstream 544758 794847 ~ 794946 (-) True G328309
TU373156 other upstream 561032 868518 ~ 868636 (-) True G328308
TU373528 other upstream 1038579 1286092 ~ 1286524 (-) True G328641

Expression Profile