RNA id: TU395477


Basic Information

Item Value
RNA id TU395477
length 317
lncRNA type inter_gene
GC content 0.36
exon number 1
gene id G347410
representative True

Chromosome Information

Item Value
chromosome id CI01000135
NCBI id null
chromosome length 1546597
location 1427763 ~ 1428079 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

AAAGACCTGGGTGTTATATTAGACAGCAACTTGTCCTTCGAAAATCATATTTCATATGTTACAAAAACAGCCTTCTTCCACCTCAGAAACATTGCTAAGATACGGAACATGTTATCTGTTTCTGATGCAGAAAAGTTAGTTCATGCTTTCATGACGTCTAGACTAGATTACTGTAATGCATTACTAGCTGGTTGTCCTGCTTCCTCAATAAACAAGCTACAATTAGTACAAAATGCAGCTGCTAGAGTTCTTACCAGGTCAAGAAAATATGATCAAATAACACCAATTTTATCATCTCTTCACTGGTTACCTATTAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU395456 lncRNA downstream 52307 1373295 ~ 1375456 (-) True G347390
TU395413 lncRNA downstream 122229 1304804 ~ 1305534 (-) True G347348
TU395351 lncRNA downstream 203745 1223800 ~ 1224018 (-) True G347293
TU395335 lncRNA downstream 211455 1147003 ~ 1216308 (-) False G347279
TU395223 lncRNA downstream 410158 1007695 ~ 1017605 (-) True G347177
TU395510 lncRNA upstream 90122 1518201 ~ 1528861 (-) True G347436
CI01000135_01423494_01425551.mRNA mRNA downstream 2208 1423077 ~ 1425555 (-) True CI01000135_01423494_01425551
CI01000135_01415988_01419906.mRNA mRNA downstream 7857 1415869 ~ 1419906 (-) True CI01000135_01415988_01419906
CI01000135_01402249_01402515.mRNA mRNA downstream 25248 1402134 ~ 1402515 (-) True CI01000135_01402249_01402515
CI01000135_01241553_01250988.mRNA mRNA downstream 176606 1241538 ~ 1251157 (-) True CI01000135_01241553_01250988
CI01000135_01130311_01159673.mRNA mRNA downstream 268090 1130311 ~ 1159673 (-) True CI01000135_01130311_01159673
CI01000135_01482974_01491167.mRNA mRNA upstream 53856 1481935 ~ 1491167 (-) True CI01000135_01482974_01491167
TU395359 other downstream 61634 1332364 ~ 1366129 (-) True G347296
TU395336 other downstream 210937 1147003 ~ 1216826 (-) True G347279
TU395205 other downstream 635818 765586 ~ 766737 (-) False G347167
TU395207 other downstream 650979 765586 ~ 776784 (-) False G347167
TU394998 other downstream 981401 446197 ~ 446362 (-) True G346986

Expression Profile