RNA id: CI01000171_00881122_00881454.mRNA


Basic Information

Item Value
RNA id CI01000171_00881122_00881454.mRNA
length 537
RNA type mRNA
GC content 0.38
exon number 2
gene id CI01000171_00881122_00881454
representative False

Chromosome Information

Item Value
chromosome id CI01000171
NCBI id null
chromosome length 912836
location 880746 ~ 881454 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

GTCAAGCATTGTGCAGAAGAGAAGGCTGGAAGGAAGTTTGTCATTTTCACTGCCAAATCTTACACCACACAGGTTGTGGCCGGGACCAACTATTTTATCAAGGTGGATGTAGGGGGTGAATACGTTCATCTGAGGGTTCACAAGTCACTCCCTCACACTGGAGAAAAACTACAGCTGCACGGGATTCAGATCTCAAAATGTCAACAGGATCCTATTATATACTTTTAAACACACTGAACAAGCAGTGCATCTTCTCTATCAGTGTCTCATTCCCTCTCTTAAATACATGCACACAGACTACAGTTCCATACTGTATATAGAACAGGTTAAAACATGTGATGTACTCAACTAATGCTGTTACACAACTTTTATTCAATTGTACACCGTTAAGATGAACCAAATATTGTGCCTACTTGTATGTAGATGAGTTTTATATGATCTTTGTTCACTTTTGTATTGTGGTGAAACAACTGCACATGAAAATGAATCATCACTCCAAATCTGTTTTACAAAAGAAGATGCTACTTCTAAAATAAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU425183 lncRNA downstream 36232 844334 ~ 844581 (-) True G372275
TU425182 lncRNA downstream 47543 830709 ~ 833270 (-) True G372274
TU425150 lncRNA downstream 135366 740314 ~ 745447 (-) True G372244
TU425167 lncRNA downstream 160735 719787 ~ 720078 (-) True G372259
TU425165 lncRNA downstream 167707 712791 ~ 713106 (-) True G372257
CI01000171_00871295_00874260.mRNA mRNA downstream 6501 871053 ~ 874312 (-) True CI01000171_00871295_00874260
CI01000171_00824754_00842657.mRNA mRNA downstream 37895 824647 ~ 842918 (-) True CI01000171_00824754_00842657
CI01000171_00788022_00797188.mRNA mRNA downstream 83625 787746 ~ 797188 (-) True CI01000171_00788022_00797188
CI01000171_00732682_00786057.mRNA mRNA downstream 94738 732527 ~ 786075 (-) False CI01000171_00732682_00786057
CI01000171_00663431_00666879.mRNA mRNA downstream 213934 663431 ~ 666879 (-) True CI01000171_00663431_00666879
TU424987 other downstream 235439 586777 ~ 645374 (-) False G372104
TU424988 other downstream 235439 587626 ~ 645374 (-) True G372104
TU425003 other downstream 339494 518420 ~ 541319 (-) True G372115
TU425022 other downstream 409505 453246 ~ 471308 (-) True G372133
TU425014 other downstream 450931 383328 ~ 429882 (-) True G372125

Expression Profile