RNA id: TU425132


Basic Information

Item Value
RNA id TU425132
length 187
RNA type TUCP
GC content 0.38
exon number 2
gene id G372229
representative False

Chromosome Information

Item Value
chromosome id CI01000171
NCBI id null
chromosome length 912836
location 863279 ~ 884846 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

AAATACTGTAGCAGTGTCACTTCTCTGCACTGTCTAAAAACACGTTTGCTTGTTTTTACATCTCGACACTGATCAACGAAACATTATTGCAATGGCGACAATGGTTGGAGGGCCATCCGAGGTGAAGCAAGCTACTCTCGAGGTGCAGAAGATCTGTGATGAGGTCAAGCATTGTGCAGAAGAGAAGGCTGGAAGGAAGTTTGTCATTTTCACTGCCAAATCTTACACCACACAGGTTGTGGCCGGGACCAACTATTTTATCAAGGTGGATGTAGGGGGTGAATACGTTCATCTGAGGGTTCACAAGTCACTCCCTCACACTGGAGAAAAACTACAGCTGCACGGGATTCAGATCTCAAAATGTCAACAGGATCCTATTATATACTTTTAAACACACTGAACAAGCAGTGCATCTTCTCTATCAGTGTCTCATTCCCTCTCTTAAATACATGCACACAGACTACAGTTCCATACTGTATATAGAACAGGTTAAAACATGTGATGTACTCAACTAATGCTGTTACACAACTTTTATTCAATTGTACACCGTTAAGATGAACCAAATATTGTGCCTACTTGTATGTAGATGAGTTTTATATGATCTTTGTTCACTTTTGTATTGTGGTGAAACAACTGCACATGAAAATGAATCATCACTCCAAATCTGTTTTACAAAAGAAGATGCTACTTCTAAAATAAAGGGAAATAATTTTCATATTCCAAATGGCAAAAAAAAAAAAAAAAAAAAAAAAAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU425183 lncRNA downstream 18698 844334 ~ 844581 (-) True G372275
TU425182 lncRNA downstream 30009 830709 ~ 833270 (-) True G372274
TU425150 lncRNA downstream 117832 740314 ~ 745447 (-) True G372244
TU425167 lncRNA downstream 143201 719787 ~ 720078 (-) True G372259
TU425165 lncRNA downstream 150173 712791 ~ 713106 (-) True G372257
CI01000171_00824754_00842657.mRNA mRNA downstream 20361 824647 ~ 842918 (-) True CI01000171_00824754_00842657
CI01000171_00788022_00797188.mRNA mRNA downstream 66091 787746 ~ 797188 (-) True CI01000171_00788022_00797188
CI01000171_00732682_00786057.mRNA mRNA downstream 77204 732527 ~ 786075 (-) False CI01000171_00732682_00786057
CI01000171_00663431_00666879.mRNA mRNA downstream 196400 663431 ~ 666879 (-) True CI01000171_00663431_00666879
CI01000171_00659729_00660264.mRNA mRNA downstream 203015 659729 ~ 660264 (-) True CI01000171_00659729_00660264
TU424987 other downstream 217905 586777 ~ 645374 (-) False G372104
TU424988 other downstream 217905 587626 ~ 645374 (-) True G372104
TU425003 other downstream 321960 518420 ~ 541319 (-) True G372115
TU425022 other downstream 391971 453246 ~ 471308 (-) True G372133
TU425014 other downstream 433397 383328 ~ 429882 (-) True G372125

Expression Profile